RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Nudt11P0C028 164 aa9.67□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Il9P15247 144 aa9.67□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Defa6P50704 93 aa9.67□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Mrgprb2Q3KNA1 338 aa9.67□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Zfp420Q7TMN8 578 aa9.67□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Olfr435Q8VFS3 313 aa9.67□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Gpa33Q9JKA5 319 aa9.67□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 FetubQ9QXC1 388 aa9.67□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Olfr1118A0A0J9YUE7 307 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Rps20P60867 119 aaKnown RBP9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Cd52Q64389 74 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Q6DIA7 600 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Vmn1r46Q9EQ45 309 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Nutf2P61971 127 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Olfr715Q8VG49 315 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 2900055J20RikQ9D6G3 140 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Dock3Q8CIQ7 2027 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Shank1D3YZU1 2167 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Igkv1-132A0A0B4J1H9 120 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 D930048N14RikA2AA67 225 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Cdx1P18111 268 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Gsx1P31315 261 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Arf6P62331 175 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Oosp2Q4FZG8 168 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Tnfsf15Q5UBV8 252 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Smap2Q7TN29 428 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Negr1Q80Z24 348 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Habp2Q8K0D2 558 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Ido2Q8R0V5 405 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Chrdl2Q8VEA6 426 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 GpnmbQ99P91 574 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 DeddQ9Z1L3 318 aa9.66□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Gm13762A2ATG2 311 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Gm10665K7N6B7 321 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Wnt10aP70701 417 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Gm10645Q3UPY1 145 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Rtp3Q5QGU6 474 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 AmtnQ9D3J8 213 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Srsf10Q9R0U0 262 aaKnown RBP9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Snrnp200Q6P4T2 2136 aaKnown RBP9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Gm15080A2BI02 449 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 BC030500E9Q6W0 185 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 PmelQ60696 626 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Vopp1Q8R1C3 172 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Olfr577Q8VH11 312 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Sumo3Q9Z172 110 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Slc17a3G3UWD9 498 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Trav6d-4Q5R1I0 115 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Mrpl43Q99N89 183 aa9.65□□□□□ -0.86
Pcdhb17-201ENSMUST00000053856 Ighv1-37A0A0A6YW32 117 aa9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Tmem139E9PX92 214 aa9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Zfp874bQ7M6X2 447 aa9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Lsm11Q8BUV6 361 aa9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Pbp2Q8VIN1 187 aa9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Defb8Q91V82 60 aa9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Cma2Q91VB1 246 aa9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Neurl1Q923S6 574 aa9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 PpifQ99KR7 206 aaKnown RBP9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Sh2d6Q9D413 297 aa9.65□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Ccr6O54689 367 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Foxa2P35583 459 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Cdx4Q07424 282 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Olfr553Q7TRS6 326 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 9130008F23RikQ9D2Z6 181 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Zfp972A2AW65 139 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Scgb2a2J3KMP9 96 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Saa1P05366 122 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Ccl7Q03366 97 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Gp2Q9D733 531 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Myoz1Q9JK37 296 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Dctn5Q9QZB9 182 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Aifm1Q9Z0X1 612 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 AtrxQ61687 2476 aaKnown RBP9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Abca7Q91V24 2159 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Gm6525A0A0A6YW33 106 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Gm44501A8R0T9 150 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Hoxa3P02831 443 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Hoxa6P09092 232 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Znf250Q7TNU6 535 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Mbnl2Q8C181 373 aaKnown RBP9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Olfr824Q8VFU4 315 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Cyb5r3Q9DCN2 301 aaKnown RBP9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Rps2-ps6A0A140T8L5 221 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Vmn1r149E9PWL6 307 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Vmn1r101E9Q365 307 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Vmn1r158G3UY92 307 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Rnd3P61588 244 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Snrpd3P62320 126 aaKnown RBP9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Trat1Q3UU67 187 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Cd200r3Q5UKY4 296 aa9.64□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Sptbn2Q68FG2 2388 aa9.63□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 OdamA1E960 273 aa9.63□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Olfr1098A2AVB0 315 aa9.63□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Olfr918E9PVZ7 325 aa9.63□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 CebpbP28033 296 aa9.63□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Olfr1356Q7TQU8 320 aa9.63□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Olfr25Q7TRD6 313 aa9.63□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Xrcc3Q9CXE6 349 aa9.63□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Cacna1hO88427 2365 aa9.63□□□□□ -0.87
Pcdhb17-201ENSMUST00000053856 Smad7O35253 426 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms