RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Gm10666K7N6B8 321 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 C1ql1O88992 258 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Lsm11Q8BUV6 361 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Lrtm1Q8BXQ3 356 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr338Q8VGK6 306 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Pip4p2Q9CZX7 257 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Tex36Q9D5N9 219 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Lysmd2Q9D7V2 215 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 LtaP09225 202 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 MiaQ61865 130 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rtn4rl2Q7M6Z0 420 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1256Q8VGP1 306 aa9.96□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cdkn1aP39689 159 aa9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Txn2P97493 166 aa9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 RfxapQ8VCG9 231 aa9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 SmagpQ99KC7 97 aa9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 CenpvQ9CXS4 252 aa9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Dolpp1Q9JMF7 238 aa9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 St6galnac3Q9WUV2 305 aa9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Igkv1-133A0A0B4J1H8 120 aa9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 RanP62827 216 aaKnown RBP9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ldlrad2Q3V0V0 142 aa9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Cabin1G3X8Q1 2187 aaKnown RBP9.96□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr1328B1ARV2 313 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr920E9Q413 310 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Iqcf6G3UWF2 157 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Cldn34c3J3QJW5 233 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm1673Q3UR78 90 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Rtl6Q505G4 243 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Mindy2Q6PDI6 601 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Q8BG31 207 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Prrg4Q8BGN6 226 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Q8VC23 124 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr916Q8VG53 310 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr206Q8VGP9 306 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Q9CR34 168 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Mettl26Q9DCS2 204 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Exph5Q0VAV2 1960 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Trav23A0A0G2JG17 115 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm10912Q3UXH0 145 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm14851Q5ERJ0 116 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Anapc16Q9CPV2 110 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Vmn1r232A2RTT5 351 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm10073E9Q3T0 114 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ren2P00796 401 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 EpcamQ99JW5 315 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Mgst3Q9CPU4 153 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Rbm7Q9CQT2 265 aaKnown RBP9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Sgms2Q9D4B1 365 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Lypd8Q9D7S0 255 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Scgb1b12A0A087WP21 93 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr364-ps1A0A140T8Q2 307 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm21732J3QM79 361 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm21921J3QNB5 361 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Sult2a5K7N6K9 285 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gfra1P97785 468 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Onecut2Q6XBJ3 505 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Slc37a1Q8R070 531 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Fam103a1Q9CQY2 119 aaKnown RBP9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 PigpQ9JHG1 132 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 RlfA2A7F4 1918 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Zfp977L7N2E7 438 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Rab5aQ9CQD1 215 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Heatr5bQ8C547 2070 aa9.95□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Cldn34c2J3QNM1 233 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 SrstQ06666 185 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm10283Q8C3L5 117 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Cldn34c1Q8K193 234 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr1002Q8VFK2 318 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Alkbh7Q9D6Z0 221 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 RprmQ9JJ72 109 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ighv1-37A0A0A6YW32 117 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Zfp971A2BFG8 470 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm27021M0QWE2 156 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Foxf2O54743 446 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 SstP60041 116 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Zfp970Q08BU3 522 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Klf2Q60843 354 aaKnown RBP9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 SprnQ8BWU1 147 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm15440D3Z3P4 90 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm5218F6YH22 154 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Crisp3Q03402 241 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Nudt3Q9JI46 168 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Kcnk5Q9JK62 502 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm14124A2AU83 715 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 FusP56959 518 aaKnown RBP9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr1209Q3SXJ3 310 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Xaf1Q5NBU8 273 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr958Q8VEY3 312 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Cacna1aP97445 2368 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr1189A2AV11 306 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ins1P01325 108 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 ElnP54320 860 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Zfp420Q7TMN8 578 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 AdtrpQ8C138 230 aa9.94□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm9047B9EJX3 177 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Foxa3P35584 353 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Sult1a1P52840 291 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr101Q920Z0 308 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Q9DAF8 208 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms