RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Timm8a1Q9WVA2 97 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Arhgef17Q80U35 2057 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm20767O70517 169 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Lin7cO88952 197 aaKnown RBP13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gabra6P16305 453 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 VhlP40338 181 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Pfn1P62962 140 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ankrd33bQ3U0L2 486 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Q8C708 225 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr482Q8VG03 323 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr770Q8VGC2 311 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Actl6bQ99MR0 426 aa13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 Cyb5r3Q9DCN2 301 aaKnown RBP13.57□□□□□ -0.24
Trim28-201ENSMUST00000005705 P01660 111 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tob1Q61471 362 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gucd1Q8BZI6 239 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr126Q8VGF0 319 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Znrf1Q91V17 227 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Trbv12-2A0A0B4J1H1 124 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr1104A2AVB5 310 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm19684G3UZ45 117 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr906K7N5P3 311 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr92L7N475 312 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 P01788 123 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Dynlt3P56387 116 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 MidnQ3TPJ7 465 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Znrd1Q791N7 123 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 EtdQ80SW5 59 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Smim4Q8C1Q6 80 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tex36Q9D5N9 219 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 OtoglF7A4A7 2325 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr753-ps1A0A140LHN3 164 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr1248A0A1L1SSZ5 307 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr1320A2AHM8 319 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm3072F6SKY8 209 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Fgf2P15655 154 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Hist1h1eP43274 219 aaKnown RBP13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Prss46Q5M8S2 314 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Dlx1Q64317 255 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Q6PIU9 354 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 SrfQ9JM73 504 aa13.56□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ctxnd1A0A1B0GST9 59 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm20830J3KML6 227 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Foxl2O88470 375 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 PpyP10601 100 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Lhfpl2Q8BGA2 222 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 StradbQ8K4T3 418 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 IdnkQ8R0J8 184 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr1370Q8VFG4 316 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Cbln1Q9R171 193 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 DspE9Q557 2883 aaKnown RBP13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Zfyve26Q5DU37 2529 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Col5a1O88207 1838 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Mettl8A2AUU0 281 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm19345G3UYD9 124 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm21719J3KMI9 230 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ptbp1P17225 527 aaKnown RBP13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 H2al1nQ497L1 109 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Rnf24Q8BGI1 148 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Saxo2Q8BQB6 394 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Mib2Q8R516 973 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr822Q8VFU1 312 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Znf672Q99LH4 468 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tm2d1Q99MB3 208 aa13.55□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm10778A0A087WNP5 499 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Trav13n-4A0A0G2JG01 110 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 P01728 117 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Fcer1gP20491 86 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tnfrsf1aP25118 454 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Kcnip4Q6PHZ8 250 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr195Q8VGQ6 308 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Trav6n-7A0A075B6A6 116 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 H2al1jA2BFR3 109 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr624F8VQI7 308 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Rdh16O54909 317 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Fgf7P36363 194 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Spam1P48794 512 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ube2zQ3UE37 356 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Cdc34Q8CFI2 235 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr641Q8VGX6 312 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Lmntd1Q9D4C1 413 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gng12Q9DAS9 72 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Aifm1Q9Z0X1 612 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tcrg-V4A0A0B4J1J8 138 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm6594J3QM43 95 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 S100a10P08207 97 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Pcgf2P23798 342 aaKnown RBP13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ifna13Q80SU4 189 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr1009Q8VFK1 314 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 CcsQ9WU84 274 aa13.54□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr282A1L1B4 308 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr39E9PVX1 319 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Foxf2O54743 446 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Zfp941Q3URY5 674 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm10309Q8C648 119 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr1350Q8VF34 308 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr968Q8VFN4 314 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Sfxn4Q925N1 313 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Scgb1b15A0A087WP50 93 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Wt1P22561 449 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms