RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 LTAP01374 205 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 SCGB2A2Q13296 93 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 GDF5OSQ5U4N7 250 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 TMEM14CQ9P0S9 112 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 SELENOKQ9Y6D0 94 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 CCDC168Q8NDH2 2452 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 IGKV2-40A0A087WW87 121 aaPredicted RBP9.66□□□□□ -0.86
CIITA-212ENST00000618207 BMPR1BO00238 502 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 IGKV2D-40P01614 121 aaPredicted RBP9.66□□□□□ -0.86
CIITA-212ENST00000618207 IGLV2-11P01706 119 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 MBD6Q96DN6 1003 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 ZNF48Q96MX3 618 aaPredicted RBP9.66□□□□□ -0.86
CIITA-212ENST00000618207 TMSB15BA0A087X1C1 80 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 IGHV1-69DA0A0B4J2H0 117 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 ZNF705FA8MVS1 300 aaPredicted RBP9.66□□□□□ -0.86
CIITA-212ENST00000618207 IGHV1-69P01742 117 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 APCSP02743 223 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 PAX8Q06710 450 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 C1orf194Q5T5A4 169 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 ZNF705AQ6ZN79 300 aaPredicted RBP9.66□□□□□ -0.86
CIITA-212ENST00000618207 C5orf56Q8N8D9 126 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 TSKUQ8WUA8 353 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 ORAOV1Q8WV07 137 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 C8orf49Q96NF6 230 aa9.66□□□□□ -0.86
CIITA-212ENST00000618207 RPP21Q9H633 154 aaKnown RBP9.66□□□□□ -0.86
CIITA-212ENST00000618207 SONP18583 2426 aaKnown RBP9.66□□□□□ -0.86
CIITA-212ENST00000618207 PMCHP20382 165 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 LCNL1Q6ZST4 164 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 FAM231DQ6ZW35 169 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 GTSF1Q8WW33 167 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 ZC2HC1AQ96GY0 325 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 AAMDCQ9H7C9 122 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 RABAC1Q9UI14 185 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 KIR2DL5BA0A0G2JN68 375 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 KIR2DL5BA0A0G2JPC4 375 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 TMEM8BA6NDV4 472 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 H3BUX3 64 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 MRPS12O15235 138 aaKnown RBP9.65□□□□□ -0.86
CIITA-212ENST00000618207 UBE2V1Q13404 147 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 TOMM20LQ6UXN7 152 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 KIR2DL5AQ8N109 375 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 FAM19A2Q8N3H0 131 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 Q8TAT8 98 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 FAM110DQ8TAY7 271 aaPredicted RBP9.65□□□□□ -0.86
CIITA-212ENST00000618207 HIF1ANQ9NWT6 349 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 PSG8Q9UQ74 426 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 CREBBPQ92793 2442 aa9.65□□□□□ -0.86
CIITA-212ENST00000618207 MUC21A0A0G2JKD1 596 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 MUC21A0A140T8X8 626 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 AVPP01185 164 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 HLA-DQA1P01909 254 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
CIITA-212ENST00000618207 MUC21Q5SSG8 566 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 M0QZ24 198 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 ZNF705DP0CH99 300 aaPredicted RBP9.64□□□□□ -0.87
CIITA-212ENST00000618207 ZNF705BP0CI00 300 aaPredicted RBP9.64□□□□□ -0.87
CIITA-212ENST00000618207 NTF3P20783 257 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 PIFOQ8TCI5 191 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 A8MWL6 223 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 APOHP02749 345 aaPredicted RBP9.64□□□□□ -0.87
CIITA-212ENST00000618207 Q6ZS46 218 aa9.64□□□□□ -0.87
CIITA-212ENST00000618207 TEX15Q9BXT5 2789 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 ZNF785A8K8V0 405 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 DIRC3C9JPN6 131 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 IGHV3-11P01762 117 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 MT-ND6P03923 174 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 BLCAPP62952 87 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 ZNF502Q8TBZ5 544 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 TRBV9A0A0B4J1U6 114 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 C19orf71A6NCJ1 209 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 K7EQM0 130 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 MSMBP08118 114 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 AMTP48728 403 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 PSG3Q16557 428 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
CIITA-212ENST00000618207 RPL7P18124 248 aaKnown RBP9.62□□□□□ -0.87
CIITA-212ENST00000618207 TFPI2P48307 235 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 TPPP2P59282 170 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 Q6ZWC4 215 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 MOB4Q9Y3A3 225 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 TRAV41A0A0B4J266 112 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 CSN1S1P47710 185 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 BATFQ16520 125 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 PRSS22Q9GZN4 317 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 RNF114Q9Y508 228 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 SORL1Q92673 2214 aa9.62□□□□□ -0.87
CIITA-212ENST00000618207 SCGB2A1O75556 95 aa9.61□□□□□ -0.87
CIITA-212ENST00000618207 TRGV3P03979 118 aa9.61□□□□□ -0.87
CIITA-212ENST00000618207 KRTDAPP60985 99 aa9.61□□□□□ -0.87
CIITA-212ENST00000618207 OCIAD2Q56VL3 154 aa9.61□□□□□ -0.87
CIITA-212ENST00000618207 TRBV12-3P01733 135 aa9.61□□□□□ -0.87
CIITA-212ENST00000618207 CRIP1P50238 77 aa9.61□□□□□ -0.87
CIITA-212ENST00000618207 SIGLECL1Q8N7X8 197 aa9.61□□□□□ -0.87
CIITA-212ENST00000618207 VGLL1Q99990 258 aa9.61□□□□□ -0.87
CIITA-212ENST00000618207 MYO9AB2RTY4 2548 aa9.61□□□□□ -0.87
CIITA-212ENST00000618207 MXRA5Q9NR99 2828 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 IGKV3-7A0A075B6H7 116 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 ERCC8Q13216 396 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms