RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 RNF223E7ERA6 249 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 C10orf55Q5SWW7 151 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 TMEM75Q8N9X5 138 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 NUP210LQ5VU65 1888 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 ARHGAP32A7KAX9 2087 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 GUSBP1Q15486 140 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 GATA4P43694 442 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 TMEM158Q8WZ71 300 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 GFRA4Q9GZZ7 299 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 A0A1B0GW64 132 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 LY96Q9Y6Y9 160 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 NEGR1Q7Z3B1 354 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 MDS2Q8NDY4 140 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 TRAV8-3A0A0A6YYJ7 113 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 OCIAD2Q56VL3 154 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 SP5Q6BEB4 398 aaPredicted RBP9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 LAIR2Q6ISS4 152 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 GAGE2AQ6NT46 116 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 Q96MF0 132 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 TRBV6-6A0A0A6YYG2 114 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 UBE2CO00762 179 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 SELLP14151 372 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 UBE2E1P51965 193 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 I3L3M4 83 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 J3QLI3 93 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 AZU1P20160 251 aa9.08□□□□□ -0.96
CCDC144B-208ENST00000618081 OTOGLQ3ZCN5 2332 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 CD5LO43866 347 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 DEFB131AP59861 70 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 ZNF625Q96I27 306 aaPredicted RBP9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 DSCR8Q96T75 97 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 PRTN3P24158 256 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 HIST1H2BLQ99880 126 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 TMEM141Q96I45 108 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 WFDC1Q9HC57 220 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 A6NNC1 897 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 LY6G6FQ5SQ64 297 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 GLRX5Q86SX6 157 aa9.07□□□□□ -0.96
CCDC144B-208ENST00000618081 IGKV1-27A0A075B6S5 117 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 C22orf46C9J442 243 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 TRBV24-1A0A075B6N3 115 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 LINC01551Q86U37 167 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 LURAP1LQ8IV03 231 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 DEFB104AQ8WTQ1 72 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 BTCP35070 178 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 Q6ZS92 163 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 PTPN13Q12923 2485 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 THSD7BQ9C0I4 1608 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 COL8A2P25067 703 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 Q0VFX4 171 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 MRPL27Q9P0M9 148 aaKnown RBP9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 IGKV1-12A0A0C4DH73 117 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 SOCS3O14543 225 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 IGKV1D-12P01611 117 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 PRB4P10163 310 aaPredicted RBP9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 SRSF2Q01130 221 aaKnown RBP9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 SPATA31B1PQ5VZV4 182 aa9.06□□□□□ -0.96
CCDC144B-208ENST00000618081 OVOL3O00110 214 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 MMP23AO75900 390 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 SRSF3P84103 164 aaKnown RBP9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 PMVKQ15126 192 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 TMEM14EPQ6UXP3 125 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 MUC6Q6W4X9 2439 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 TRAV3A0A0B4J244 114 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 VWC2Q2TAL6 325 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 DKK1O94907 266 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 Q6P435 159 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 DMRTC2Q8IXT2 367 aaPredicted RBP9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 TMEM243Q9BU79 118 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 NMSQ5H8A3 153 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 VSIRQ9H7M9 311 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 XCL2Q9UBD3 114 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 E7EQL1 145 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 UBE2WQ96B02 151 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 K7ENP7 123 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 CFHR3Q02985 330 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 MUC4Q99102 2169 aa9.05□□□□□ -0.96
CCDC144B-208ENST00000618081 IGKV1D-17A0A075B6S4 117 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 SHANK2-AS3Q9BTD1 123 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 SPANXA1Q9NS26 97 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 IGHV1-69DA0A0B4J2H0 117 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 IGHV1-69P01742 117 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 CITED2Q99967 270 aaPredicted RBP9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 SPINK13Q1W4C9 94 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 SLAQ13239 276 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 C1orf194Q5T5A4 169 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 LYPD2Q6UXB3 125 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 SONP18583 2426 aaKnown RBP9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 LINC00473A8K010 186 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 LHFPL1Q86WI0 220 aa9.04□□□□□ -0.96
CCDC144B-208ENST00000618081 NTF4P34130 210 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 PNRC2Q9NPJ4 139 aaKnown RBP9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 A0A087X0K7 114 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 MST1LQ2TV78 715 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 IGHV2-70DA0A0C4DH43 119 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 FGF16O43320 207 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 CDKN1BP46527 198 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 RUSC1-AS1Q66K80 236 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms