RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ASAH2BP0C7U1 165 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 SSR2P43308 183 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 RTL8BQ17RB0 113 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 HES3Q5TGS1 186 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 REG3GQ6UW15 175 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 ZNF793Q6ZN11 406 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 Q6ZRU5 148 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 CEND1Q8N111 149 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 MYOZ3Q8TDC0 251 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 FGF14Q92915 247 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 NHP2Q9NX24 153 aaKnown RBP3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 WNT9BO14905 357 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 HLA-DOBP13765 273 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 GFERP55789 205 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 EBI3Q14213 229 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 ABCA11PQ4W5N1 156 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 C1orf140Q5VVS0 124 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 FOXL2NBQ6ZUU3 175 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 PRIMA1Q86XR5 153 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 RPP25LQ8N5L8 163 aaKnown RBP3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 C6orf106Q9H6K1 298 aaPredicted RBP3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 FAM60AQ9NP50 221 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 TCRBV4S1A1TA0A5B7 111 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 IZUMO1RA6ND01 250 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 A8MWV9 139 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 K7EQD1 137 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 NDUFS5O43920 106 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 PPYP01298 95 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 MGST1P10620 155 aaKnown RBP3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 MORN5Q5VZ52 161 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 RPS19BP1Q86WX3 136 aaKnown RBP3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 C15orf53Q8NAA6 179 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 C11orf72Q8NBR9 251 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 URB1-AS1Q96HZ7 61 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 CYYR1Q96J86 154 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 PLA2G2FQ9BZM2 168 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 TMEM14AQ9Y6G1 99 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 MKI67P46013 3256 aaKnown RBP3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 TRBV20OR9-2A0A075B6H5 130 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 SMIM27A0A1W2PRY6 76 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 EPOPA6NHQ4 379 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 TMEM14DPA8MWL7 114 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 CDX4O14627 284 aaPredicted RBP3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 SS18L1O75177 396 aaPredicted RBP3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 COX7CP15954 63 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 TFF2Q03403 129 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 ZC2HC1BQ5TFG8 222 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 GPX7Q96SL4 187 aaPredicted RBP3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 AICDAQ9GZX7 198 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 OSTCQ9NRP0 149 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 TAC3Q9UHF0 121 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 KLK5Q9Y337 293 aaPredicted RBP3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 CUL9Q8IWT3 2517 aa3.86□□□□□ -1.79
SPTBN1-206ENST00000602898 LYZL6O75951 148 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 TRACP01848 142 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 CD7P09564 240 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 HLA-DRB4P13762 266 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 ZFP36P26651 326 aaKnown RBP3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 FOXA3P55318 350 aaPredicted RBP3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 RPL30P62888 115 aaKnown RBP3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 SLC48A1Q6P1K1 146 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 CLEC19AQ6UXS0 136 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 ZNF525Q8N782 197 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 ODF3Q96PU9 254 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 CHAC1Q9BUX1 264 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 MSRB1Q9NZV6 116 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 HLA-DRB4X5D2U9 266 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 CACNA1AO00555 2505 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 SCN3AQ9NY46 2000 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 EML5Q05BV3 1969 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 WI2-2373I1.2A0A1W2PRP0 233 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 IGHV3-9P01782 118 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 BEAN1Q3B7T3 259 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 LGALS9BQ3B8N2 356 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 LGALS9CQ6DKI2 356 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 GFRALQ6UXV0 394 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 FAM57AQ8TBR7 257 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 WFDC5Q8TCV5 224 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 CALYQ9NYX4 217 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 PCDH15Q96QU1 1955 aa3.85□□□□□ -1.79
SPTBN1-206ENST00000602898 C15orf62A8K5M9 175 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 IGKV1D-33P01593 117 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 IGKV1-33P01594 117 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 STATHP02808 62 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 SCGB1C2P0DMR2 95 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 SPTBP11277 2137 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 PSMB8P28062 276 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 HLA-DMBP28068 263 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 C6orf201Q7Z4U5 140 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 POM121L12Q8N7R1 296 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 TMEM158Q8WZ71 300 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 PAXXQ9BUH6 204 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 SLC25A22Q9H936 323 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 TDRD6O60522 2096 aaKnown RBP3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 HEATR5BQ9P2D3 2071 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 HTTP42858 3142 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 MYO9BQ13459 2157 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 IGLV9-49A0A0B4J1Y8 123 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 TRAV2A0A0B4J234 112 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 PIGBOS1A0A0B4J2F0 54 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms