RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PRR25Q96S07 402 aa12.86□□□□□ -0.35
PRKCSH-217ENST00000592741 TPPP3Q9BW30 176 aa12.86□□□□□ -0.35
PRKCSH-217ENST00000592741 A0A087X0K7 114 aa12.85□□□□□ -0.35
PRKCSH-217ENST00000592741 LINC01548A6NM66 108 aa12.85□□□□□ -0.35
PRKCSH-217ENST00000592741 LINC00614P0C842 121 aa12.85□□□□□ -0.35
PRKCSH-217ENST00000592741 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
PRKCSH-217ENST00000592741 CCL19Q99731 98 aa12.85□□□□□ -0.35
PRKCSH-217ENST00000592741 TRBV7-1A0A0A6YYK4 115 aa12.85□□□□□ -0.35
PRKCSH-217ENST00000592741 IGHV1-69DA0A0B4J2H0 117 aa12.85□□□□□ -0.35
PRKCSH-217ENST00000592741 IGHV1-69P01742 117 aa12.85□□□□□ -0.35
PRKCSH-217ENST00000592741 IGHV3OR16-10A0A075B7F0 116 aa12.84□□□□□ -0.35
PRKCSH-217ENST00000592741 IGHV1-24A0A0C4DH33 117 aa12.84□□□□□ -0.35
PRKCSH-217ENST00000592741 C2orf70A6NJV1 201 aa12.84□□□□□ -0.35
PRKCSH-217ENST00000592741 M0QZK8 103 aa12.84□□□□□ -0.35
PRKCSH-217ENST00000592741 BUB3O43684 328 aa12.84□□□□□ -0.35
PRKCSH-217ENST00000592741 CYB5R2Q6BCY4 276 aa12.84□□□□□ -0.35
PRKCSH-217ENST00000592741 LCN12Q6JVE5 192 aa12.84□□□□□ -0.35
PRKCSH-217ENST00000592741 TMEM219Q86XT9 240 aa12.84□□□□□ -0.35
PRKCSH-217ENST00000592741 IGHG4P01861 327 aa12.83□□□□□ -0.35
PRKCSH-217ENST00000592741 HLA-DMBP28068 263 aa12.83□□□□□ -0.35
PRKCSH-217ENST00000592741 RPS20P60866 119 aaKnown RBP12.83□□□□□ -0.35
PRKCSH-217ENST00000592741 IGFL4Q6B9Z1 124 aa12.83□□□□□ -0.35
PRKCSH-217ENST00000592741 VGLL1Q99990 258 aa12.83□□□□□ -0.35
PRKCSH-217ENST00000592741 CLEC5AQ9NY25 188 aa12.83□□□□□ -0.35
PRKCSH-217ENST00000592741 TMSB15BA0A087X1C1 80 aa12.83□□□□□ -0.36
PRKCSH-217ENST00000592741 IGHV4-61A0A0C4DH41 118 aa12.83□□□□□ -0.36
PRKCSH-217ENST00000592741 BMI1P35226 326 aa12.83□□□□□ -0.36
PRKCSH-217ENST00000592741 NUTF2P61970 127 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-217ENST00000592741 ATP5G2Q06055 141 aa12.83□□□□□ -0.36
PRKCSH-217ENST00000592741 KLHDC1Q8N7A1 406 aa12.83□□□□□ -0.36
PRKCSH-217ENST00000592741 Q8TAT8 98 aa12.83□□□□□ -0.36
PRKCSH-217ENST00000592741 TMEM70Q9BUB7 260 aa12.83□□□□□ -0.36
PRKCSH-217ENST00000592741 TRAV40A0A0B4J280 105 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 LYZL1Q6UWQ5 148 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 ZNF493Q6ZR52 646 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 C10orf105Q8TEF2 133 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 SLC50A1Q9BRV3 221 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 UQCR10Q9UDW1 63 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 TRAV41A0A0B4J266 112 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 CLPSL1A2RUU4 121 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 NDUFS8O00217 210 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 RNF224P0DH78 156 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 SSTP61278 116 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 ATOH7Q8N100 152 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 METTL26Q96S19 204 aa12.82□□□□□ -0.36
PRKCSH-217ENST00000592741 CHD8Q9HCK8 2581 aa12.81□□□□□ -0.36
PRKCSH-217ENST00000592741 LEPROTL1O95214 131 aa12.81□□□□□ -0.36
PRKCSH-217ENST00000592741 OR5AL1P0C617 328 aa12.81□□□□□ -0.36
PRKCSH-217ENST00000592741 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.81□□□□□ -0.36
PRKCSH-217ENST00000592741 NCOR2Q9Y618 2525 aa12.81□□□□□ -0.36
PRKCSH-217ENST00000592741 IGLC3P0DOY3 106 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 CLEC2AQ6UVW9 174 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 BRD3OSQ6XYD6 125 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 ITPR1Q14643 2758 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 TRAV9-2A0A087WT02 112 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 IGHV3-66A0A0C4DH42 116 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 C20orf202A1L168 122 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 FAM223BA6NKX1 122 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 CRIP2P52943 208 aaPredicted RBP12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 FAM223AQ8IWN6 122 aa12.8□□□□□ -0.36
PRKCSH-217ENST00000592741 MED13LQ71F56 2210 aa12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 RBAKDNA6NC62 111 aa12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 CSN3P07498 182 aa12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 ZNF80P51504 273 aaPredicted RBP12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 ZNF138P52744 262 aa12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 SRSF2Q01130 221 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 C19orf54Q5BKX5 351 aa12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 PIFOQ8TCI5 191 aa12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 MEGF9Q9H1U4 602 aa12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 FER1L6-AS1Q8NA97 138 aa12.79□□□□□ -0.36
PRKCSH-217ENST00000592741 TMEM213A2RRL7 107 aa12.78□□□□□ -0.36
PRKCSH-217ENST00000592741 TMEM8BA6NDV4 472 aa12.78□□□□□ -0.36
PRKCSH-217ENST00000592741 CRXO43186 299 aaPredicted RBP12.78□□□□□ -0.36
PRKCSH-217ENST00000592741 ATP5J2P56134 94 aa12.78□□□□□ -0.36
PRKCSH-217ENST00000592741 ERCC8Q13216 396 aa12.78□□□□□ -0.36
PRKCSH-217ENST00000592741 SYS1-DBNDD2H3BUS1 97 aa12.77□□□□□ -0.36
PRKCSH-217ENST00000592741 FAM104BQ5XKR9 115 aa12.77□□□□□ -0.36
PRKCSH-217ENST00000592741 FA2HQ7L5A8 372 aa12.77□□□□□ -0.36
PRKCSH-217ENST00000592741 SPATA12Q7Z6I5 190 aa12.77□□□□□ -0.36
PRKCSH-217ENST00000592741 RNF182Q8N6D2 247 aa12.77□□□□□ -0.36
PRKCSH-217ENST00000592741 HSPB8Q9UJY1 196 aa12.77□□□□□ -0.36
PRKCSH-217ENST00000592741 IGHV3OR16-13A0A075B7E8 117 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 IGHV3-74A0A0B4J1X5 117 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 PRAC2D3DTV9 90 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 ZNF207O43670 478 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 TRGV3P03979 118 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 HNRNPA3P51991 378 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 MAJINQ3KP22 176 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 Q6ZN92 141 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 LINC00173Q6ZV60 143 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 AP5S1Q9NUS5 200 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 LINC00527Q9UJ94 153 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 U3KQE9 123 aa12.77□□□□□ -0.37
PRKCSH-217ENST00000592741 FABP5P3A8MUU1 101 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 RPLP1P05386 114 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 IGHV4-38-2P0DP08 117 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 PRSS3P2Q8NHM4 247 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 MRPL53Q96EL3 112 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 MAP1LC3CQ9BXW4 147 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms