RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 MCEEQ96PE7 176 aa0.91□□□□□ -2.26
COPS3-213ENST00000577210 FAM107BQ9H098 131 aa0.91□□□□□ -2.26
COPS3-213ENST00000577210 CYSTM1Q9H1C7 97 aa0.91□□□□□ -2.26
COPS3-213ENST00000577210 BANF2Q9H503 90 aa0.91□□□□□ -2.26
COPS3-213ENST00000577210 CALML5Q9NZT1 146 aa0.91□□□□□ -2.26
COPS3-213ENST00000577210 SNURFQ9Y675 71 aa0.91□□□□□ -2.26
COPS3-213ENST00000577210 FBN1P35555 2871 aaKnown RBP0.91□□□□□ -2.26
COPS3-213ENST00000577210 COL11A1P12107 1806 aaPredicted RBP0.91□□□□□ -2.26
COPS3-213ENST00000577210 ARAP1Q96P48 1450 aa0.91□□□□□ -2.26
COPS3-213ENST00000577210 KIAA2026Q5HYC2 2103 aa0.91□□□□□ -2.26
COPS3-213ENST00000577210 BAHCC1Q9P281 2608 aa0.9□□□□□ -2.26
COPS3-213ENST00000577210 IGKV2-40A0A087WW87 121 aaPredicted RBP0.9□□□□□ -2.27
COPS3-213ENST00000577210 TRBV6-7A0A0A0MS04 114 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 LOC107984156A0A0G2JMH3 177 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 TRBV7-6A0A0J9YX20 115 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 C3orf85A0A1B0GTC6 90 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 A0A1B0GX51 115 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 TMEM189A5PLL7 270 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 PCNX2A6NKB5 2137 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 C9JAW5 83 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 F8W1H4 67 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 H3BMG7 143 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 OR2H2O95918 312 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 IGKV2D-40P01614 121 aaPredicted RBP0.9□□□□□ -2.27
COPS3-213ENST00000577210 ANGP03950 147 aaKnown RBP0.9□□□□□ -2.27
COPS3-213ENST00000577210 PRB1P04280 392 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 PAEPP09466 180 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 FOXA3P55318 350 aaPredicted RBP0.9□□□□□ -2.27
COPS3-213ENST00000577210 DIAPH2-AS1Q14236 149 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 SMCO1Q147U7 214 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 ZCCHC23Q6ZST2 131 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 TEN1Q86WV5 123 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 ARL17AQ8IVW1 177 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 TCTE3Q8IZS6 198 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 PATE1Q8WXA2 126 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 DIRC1Q969H9 104 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 LINC00052Q96N35 136 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 CST11Q9H112 138 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 TMEM138Q9NPI0 162 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 ORMDL1Q9P0S3 153 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 CRCT1Q9UGL9 99 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 HIGD1AQ9Y241 93 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 BRWD1Q9NSI6 2320 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 LAMB4A4D0S4 1761 aa0.9□□□□□ -2.27
COPS3-213ENST00000577210 NUP210Q8TEM1 1887 aaPredicted RBP0.9□□□□□ -2.27
COPS3-213ENST00000577210 COL24A1Q17RW2 1714 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 ICE1Q9Y2F5 2266 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 SCN8AQ9UQD0 1980 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 MED23Q9ULK4 1368 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 IGKV3-7A0A075B6H7 116 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 TRAV27A0A087WT01 109 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 A0A096LPI6 279 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 LOC107986453A0A1B0GWG9 222 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 TRBV6-4A0A1B0GX49 114 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 H3BRM9 83 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 GEMIN2O14893 280 aaKnown RBP0.89□□□□□ -2.27
COPS3-213ENST00000577210 CCL16O15467 120 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 TNFSF15O95150 251 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 TCRAP04437 139 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 ZNF25P17030 456 aaPredicted RBP0.89□□□□□ -2.27
COPS3-213ENST00000577210 CKS1BP61024 79 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 CNBPP62633 177 aaKnown RBP0.89□□□□□ -2.27
COPS3-213ENST00000577210 PSPHP78330 225 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 MRPS36P82909 103 aaKnown RBP0.89□□□□□ -2.27
COPS3-213ENST00000577210 HSD17B12Q53GQ0 312 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 Q5XG85 94 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 CASC2Q6XLA1 102 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 FAM19A2Q8N3H0 131 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 OR5A2Q8NGI9 324 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 C4orf3Q8WVX3 66 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 OBSCN-AS1Q96MR7 158 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 LIMD2Q9BT23 127 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 SMIM3Q9BZL3 60 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 MED9Q9NWA0 146 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 SOX21Q9Y651 276 aaPredicted RBP0.89□□□□□ -2.27
COPS3-213ENST00000577210 MICAL3Q7RTP6 2002 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 CEP152O94986 1710 aa0.89□□□□□ -2.27
COPS3-213ENST00000577210 CECR2Q9BXF3 1484 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.88□□□□□ -2.27
COPS3-213ENST00000577210 EDF1O60869 148 aaKnown RBP0.88□□□□□ -2.27
COPS3-213ENST00000577210 KLF7O75840 302 aaPredicted RBP0.88□□□□□ -2.27
COPS3-213ENST00000577210 PPYP01298 95 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 TRACP01848 142 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 HBDP02042 147 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 SLC25A5P05141 298 aaKnown RBP0.88□□□□□ -2.27
COPS3-213ENST00000577210 RPL22P35268 128 aaKnown RBP0.88□□□□□ -2.27
COPS3-213ENST00000577210 SRP9P49458 86 aaKnown RBP0.88□□□□□ -2.27
COPS3-213ENST00000577210 GTF2A1P52655 376 aaPredicted RBP0.88□□□□□ -2.27
COPS3-213ENST00000577210 PCBD1P61457 104 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 RPS28P62857 69 aaKnown RBP0.88□□□□□ -2.27
COPS3-213ENST00000577210 PSG9Q00887 426 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 NEDD8Q15843 81 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 MPV17LQ2QL34 196 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 UNQ6190/PRO20217Q6UXQ8 127 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 ZNF431Q8TF32 576 aaPredicted RBP0.88□□□□□ -2.27
COPS3-213ENST00000577210 NAT14Q8WUY8 206 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 KRTAP4-1Q9BYQ7 146 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 SPANXA1Q9NS26 97 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 HSPB8Q9UJY1 196 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 ZFP30Q9Y2G7 519 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms