RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 SIGLECL1Q8N7X8 197 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 ZC2HC1AQ96GY0 325 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 KCNS1Q96KK3 526 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 C17orf77Q96MU5 243 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 PRR25Q96S07 402 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 PPP1R14DQ9NXH3 145 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 PEF1Q9UBV8 284 aaKnown RBP5.26□□□□□ -1.57
SMG6-217ENST00000575338 UFC1Q9Y3C8 167 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 DCHS2Q6V1P9 2916 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 ABCA1O95477 2261 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 TRAV8-1A0A0A6YYK1 113 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 TRBV7-9A0A0J9YWB2 115 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 PCP4L1A6NKN8 68 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 LINC01548A6NM66 108 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 RNF223E7ERA6 249 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 J3QKU1 62 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 M0R3E3 92 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 OVOL1O14753 267 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 SPINK4O60575 86 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 CA1P00915 261 aaPredicted RBP5.25□□□□□ -1.57
SMG6-217ENST00000575338 FSHBP01225 129 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 IGHG4P01861 327 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 IGHV4-31P0DP07 118 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 PMCHP20382 165 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 SRIP30626 198 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 ID1P41134 155 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 HIST1H1AQ02539 215 aaPredicted RBP5.25□□□□□ -1.57
SMG6-217ENST00000575338 SRSF1Q07955 248 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMG6-217ENST00000575338 KLF5Q13887 457 aaPredicted RBP5.25□□□□□ -1.57
SMG6-217ENST00000575338 DEFB112Q30KQ8 113 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 PYY3Q5JQD4 70 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 GFI1BQ5VTD9 330 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 Q6YL49 198 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 GATD1Q8NB37 220 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 OR4X2Q8NGF9 303 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 PGLYRP4Q96LB8 373 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 C16orf92Q96LL3 132 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 SGK494Q96LW2 274 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 PRDM13Q9H4Q3 707 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 DAZ1Q9NQZ3 744 aaKnown RBP5.25□□□□□ -1.57
SMG6-217ENST00000575338 RELNP78509 3460 aa5.25□□□□□ -1.57
SMG6-217ENST00000575338 AKAP6Q13023 2319 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 ANKRD17O75179 2603 aaKnown RBP5.24□□□□□ -1.57
SMG6-217ENST00000575338 CLPSL1A2RUU4 121 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 GRIFINA4D1Z8 144 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 SH2D7A6NKC9 451 aaPredicted RBP5.24□□□□□ -1.57
SMG6-217ENST00000575338 IFITM10A6NMD0 228 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 F2Z2F3 143 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 HSBP1O75506 76 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 CAMPP49913 170 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 ZNF138P52744 262 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 CFHR3Q02985 330 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 C9orf47Q6ZRZ4 202 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 C8orf86Q6ZUL3 223 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 TCF24Q7RTU0 167 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 GPHB5Q86YW7 130 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 OR10J6PQ8NGY7 276 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 GLMPQ8WWB7 406 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 NRGNQ92686 78 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 CHCHD1Q96BP2 118 aaKnown RBP5.24□□□□□ -1.57
SMG6-217ENST00000575338 LINC00477Q96M19 166 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 Q96MF0 132 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 SMAD5-AS1Q9Y6J3 95 aa5.24□□□□□ -1.57
SMG6-217ENST00000575338 IGKV2-40A0A087WW87 121 aaPredicted RBP5.23□□□□□ -1.57
SMG6-217ENST00000575338 IGHV3-35A0A0C4DH35 117 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 IGHV7-4-1A0A0J9YVY3 117 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 M0QZ24 198 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 SH2D1AO60880 128 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 ZNF324O75467 553 aaPredicted RBP5.23□□□□□ -1.57
SMG6-217ENST00000575338 SERF1AO75920 110 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 AVPP01185 164 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 IGKV2D-40P01614 121 aaPredicted RBP5.23□□□□□ -1.57
SMG6-217ENST00000575338 IGHV4-59P01825 116 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 GPX1P07203 203 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 PSMB8P28062 276 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 AMTP48728 403 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 PKIAP61925 76 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 BLCAPP62952 87 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 SLAQ13239 276 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 LINC00322Q6ZN03 302 aaPredicted RBP5.23□□□□□ -1.57
SMG6-217ENST00000575338 SMIM15Q7Z3B0 74 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 C18orf32Q8TCD1 76 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 GTSF1Q8WW33 167 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 NOL4LQ96MY1 436 aaPredicted RBP5.23□□□□□ -1.57
SMG6-217ENST00000575338 NRN1Q9NPD7 142 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 GSN-AS1Q9NRJ2 163 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 LINC00527Q9UJ94 153 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 MYO18BQ8IUG5 2567 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 MED13LQ71F56 2210 aa5.23□□□□□ -1.57
SMG6-217ENST00000575338 DOPEY2Q9Y3R5 2298 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 LOC102724200A0A096LPH7 203 aaPredicted RBP5.22□□□□□ -1.57
SMG6-217ENST00000575338 SCGB1D1O95968 90 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 ORM1P02763 201 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 OR5AL1P0C617 328 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 GZMBP10144 247 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 CTRLP40313 264 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 LINC01559Q495D7 138 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 ZNF493Q6ZR52 646 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 REC114Q7Z4M0 266 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms