RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 RPL7P18124 248 aaKnown RBP13.11□□□□□ -0.31
CMTM3-213ENST00000566756 MINOS1Q5TGZ0 78 aa13.11□□□□□ -0.31
CMTM3-213ENST00000566756 Q8N6K4 173 aa13.11□□□□□ -0.31
CMTM3-213ENST00000566756 AP5S1Q9NUS5 200 aa13.11□□□□□ -0.31
CMTM3-213ENST00000566756 MINOS1-NBL1R4GNA1 71 aa13.11□□□□□ -0.31
CMTM3-213ENST00000566756 AKAP6Q13023 2319 aa13.11□□□□□ -0.31
CMTM3-213ENST00000566756 F8W735 103 aaPredicted RBP13.11□□□□□ -0.31
CMTM3-213ENST00000566756 TOX4O94842 621 aa13.11□□□□□ -0.31
CMTM3-213ENST00000566756 SAPCD1Q5SSQ6 148 aa13.11□□□□□ -0.31
CMTM3-213ENST00000566756 C21orf62Q9NYP8 219 aa13.11□□□□□ -0.31
CMTM3-213ENST00000566756 HINT1P49773 126 aaPredicted RBP13.1□□□□□ -0.31
CMTM3-213ENST00000566756 LINC01545Q5VT33 79 aa13.1□□□□□ -0.31
CMTM3-213ENST00000566756 LINC00173Q6ZV60 143 aa13.1□□□□□ -0.31
CMTM3-213ENST00000566756 TMUB1Q9BVT8 246 aa13.1□□□□□ -0.31
CMTM3-213ENST00000566756 U3KQK5 164 aa13.1□□□□□ -0.31
CMTM3-213ENST00000566756 IGHV4-39P01824 125 aa13.09□□□□□ -0.31
CMTM3-213ENST00000566756 RPS20P60866 119 aaKnown RBP13.09□□□□□ -0.31
CMTM3-213ENST00000566756 SRSF1Q07955 248 aaKnown RBP eCLIP13.09□□□□□ -0.31
CMTM3-213ENST00000566756 Q71RC1 249 aaPredicted RBP13.09□□□□□ -0.31
CMTM3-213ENST00000566756 CCL19Q99731 98 aa13.09□□□□□ -0.31
CMTM3-213ENST00000566756 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
CMTM3-213ENST00000566756 HES1Q14469 280 aa13.09□□□□□ -0.31
CMTM3-213ENST00000566756 OR10AG1Q8NH19 301 aa13.09□□□□□ -0.31
CMTM3-213ENST00000566756 COX11Q9Y6N1 276 aa13.09□□□□□ -0.31
CMTM3-213ENST00000566756 UBR5O95071 2799 aaPredicted RBP13.08□□□□□ -0.31
CMTM3-213ENST00000566756 M0R3E3 92 aa13.08□□□□□ -0.32
CMTM3-213ENST00000566756 KLK9Q2XQG4 91 aa13.08□□□□□ -0.32
CMTM3-213ENST00000566756 KLF17Q5JT82 389 aaPredicted RBP13.08□□□□□ -0.32
CMTM3-213ENST00000566756 SLC25A34Q6PIV7 304 aa13.08□□□□□ -0.32
CMTM3-213ENST00000566756 ZNF738Q8NE65 137 aa13.08□□□□□ -0.32
CMTM3-213ENST00000566756 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.32
CMTM3-213ENST00000566756 TMEM189A5PLL7 270 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 KLRD1Q13241 179 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 PRR31Q5SQ13 230 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 FA2HQ7L5A8 372 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 ZNF747Q9BV97 191 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 BPESC1Q9GZL8 116 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 SCRT2Q9NQ03 307 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 LMO4P61968 165 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 VMO1Q7Z5L0 202 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 DPF1Q92782 380 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 C8orf49Q96NF6 230 aa13.07□□□□□ -0.32
CMTM3-213ENST00000566756 ZFP36P26651 326 aaKnown RBP13.06□□□□□ -0.32
CMTM3-213ENST00000566756 RAB9AP51151 201 aa13.06□□□□□ -0.32
CMTM3-213ENST00000566756 ZNF138P52744 262 aa13.06□□□□□ -0.32
CMTM3-213ENST00000566756 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
CMTM3-213ENST00000566756 PRSS3P2Q8NHM4 247 aa13.06□□□□□ -0.32
CMTM3-213ENST00000566756 PMCHL2Q9BQD1 86 aa13.06□□□□□ -0.32
CMTM3-213ENST00000566756 NDUFS8O00217 210 aa13.05□□□□□ -0.32
CMTM3-213ENST00000566756 SH2D1AO60880 128 aa13.05□□□□□ -0.32
CMTM3-213ENST00000566756 BMI1P35226 326 aa13.05□□□□□ -0.32
CMTM3-213ENST00000566756 NDPQ00604 133 aa13.05□□□□□ -0.32
CMTM3-213ENST00000566756 PRR25Q96S07 402 aa13.05□□□□□ -0.32
CMTM3-213ENST00000566756 RABAC1Q9UI14 185 aa13.05□□□□□ -0.32
CMTM3-213ENST00000566756 hDV102S1A0JD36 115 aa13.05□□□□□ -0.32
CMTM3-213ENST00000566756 LYZL1Q6UWQ5 148 aa13.05□□□□□ -0.32
CMTM3-213ENST00000566756 C12orf54Q6X4T0 127 aa13.05□□□□□ -0.32
CMTM3-213ENST00000566756 CSN3P07498 182 aa13.04□□□□□ -0.32
CMTM3-213ENST00000566756 CTSGP08311 255 aa13.04□□□□□ -0.32
CMTM3-213ENST00000566756 ORMDL3Q8N138 153 aa13.04□□□□□ -0.32
CMTM3-213ENST00000566756 BCL6BQ8N143 479 aaPredicted RBP13.04□□□□□ -0.32
CMTM3-213ENST00000566756 NPFFR1Q9GZQ6 430 aa13.04□□□□□ -0.32
CMTM3-213ENST00000566756 COL12A1Q99715 3063 aa13.04□□□□□ -0.32
CMTM3-213ENST00000566756 WNK2Q9Y3S1 2297 aa13.04□□□□□ -0.32
CMTM3-213ENST00000566756 IGHV2-70DA0A0C4DH43 119 aa13.03□□□□□ -0.32
CMTM3-213ENST00000566756 NCBP2LA6PVI3 153 aaKnown RBP13.03□□□□□ -0.32
CMTM3-213ENST00000566756 COX6B1P14854 86 aa13.03□□□□□ -0.32
CMTM3-213ENST00000566756 UBE2V1Q13404 147 aa13.03□□□□□ -0.32
CMTM3-213ENST00000566756 FBLN7Q53RD9 439 aa13.03□□□□□ -0.32
CMTM3-213ENST00000566756 UNQ5815/PRO19632Q6UWF5 114 aa13.03□□□□□ -0.32
CMTM3-213ENST00000566756 EGR2P11161 476 aaPredicted RBP13.03□□□□□ -0.32
CMTM3-213ENST00000566756 RELQ04864 619 aaPredicted RBP13.03□□□□□ -0.32
CMTM3-213ENST00000566756 PIMREGQ9BSJ6 248 aa13.03□□□□□ -0.32
CMTM3-213ENST00000566756 SIRPDQ9H106 197 aa13.03□□□□□ -0.32
CMTM3-213ENST00000566756 S4R3C0 116 aa13.03□□□□□ -0.32
CMTM3-213ENST00000566756 A0A087X0K7 114 aa13.02□□□□□ -0.32
CMTM3-213ENST00000566756 FAM106CPP0CH98 169 aa13.02□□□□□ -0.32
CMTM3-213ENST00000566756 TMEM11P17152 192 aa13.02□□□□□ -0.32
CMTM3-213ENST00000566756 DYNAPQ8N1N2 210 aa13.02□□□□□ -0.32
CMTM3-213ENST00000566756 C10orf105Q8TEF2 133 aa13.02□□□□□ -0.32
CMTM3-213ENST00000566756 PRELID3AQ96N28 172 aa13.02□□□□□ -0.32
CMTM3-213ENST00000566756 IGHV7-81A0A0B4J1V7 117 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 IGLC6P0CF74 106 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 PTTG1IPP53801 180 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 HIST1H1AQ02539 215 aaPredicted RBP13.01□□□□□ -0.33
CMTM3-213ENST00000566756 FAM110DQ8TAY7 271 aaPredicted RBP13.01□□□□□ -0.33
CMTM3-213ENST00000566756 TPPP3Q9BW30 176 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 CNFNQ9BYD5 112 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 FAM208BQ5VWN6 2430 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 LRRK2Q5S007 2527 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 D6R8Y8 96 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 TCF21O43680 179 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 COX8AP10176 69 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 ATP5J2P56134 94 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 BVES-AS1Q5T3Y7 98 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 ASCL2Q99929 193 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 SIGLEC8Q9NYZ4 499 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 SMAD5-AS1Q9Y6J3 95 aa13.01□□□□□ -0.33
CMTM3-213ENST00000566756 ABCA1O95477 2261 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 IGKV2-40A0A087WW87 121 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms