RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 FSIP2Q5CZC0 6907 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 TRBV6-7A0A0A0MS04 114 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 BORCS7-ASMTA0A0B4J1R7 106 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 TRAV10A0A0B4J240 114 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 TRAV3A0A0B4J244 114 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 MAP1LC3B2A6NCE7 125 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 OR2T8A6NH00 312 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 BBIP1A8MTZ0 92 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 B4DSR2 109 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 H3BRM9 83 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 HIST1H2BKO60814 126 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 SMIM24O75264 130 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 SULT1C4O75897 302 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 ERC2-IT1O76042 136 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 IGHV3-33P01772 117 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 HIST1H2BJP06899 126 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 TPT1P13693 172 aaKnown RBP0.51□□□□□ -2.33
CHD9-211ENST00000564600 INSL3P51460 131 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 PSPHP78330 225 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 CDK6Q00534 326 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 TOMM20LQ6UXN7 152 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 LINC00322Q6ZN03 302 aaPredicted RBP0.51□□□□□ -2.33
CHD9-211ENST00000564600 C3orf62Q6ZUJ4 267 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 GKN2Q86XP6 184 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 CCL4L1Q8NHW4 92 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 BORCS5Q969J3 196 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 RAB37Q96AX2 223 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 MUCL1Q96DR8 90 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 HYLS1Q96M11 299 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 OBSCN-AS1Q96MR7 158 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 DDA1Q9BW61 102 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 OR2H1Q9GZK4 316 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 PCBD2Q9H0N5 130 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 CACYBPQ9HB71 228 aaKnown RBP0.51□□□□□ -2.33
CHD9-211ENST00000564600 ORMDL1Q9P0S3 153 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 PCTPQ9UKL6 214 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 PAIP2BQ9ULR5 123 aaKnown RBP0.51□□□□□ -2.33
CHD9-211ENST00000564600 BOKQ9UMX3 212 aaPredicted RBP0.51□□□□□ -2.33
CHD9-211ENST00000564600 UFC1Q9Y3C8 167 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 C22orf24Q9Y442 160 aa0.51□□□□□ -2.33
CHD9-211ENST00000564600 CNTRLQ7Z7A1 2325 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
CHD9-211ENST00000564600 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.5□□□□□ -2.33
CHD9-211ENST00000564600 PNMA8CA0A1B0GUJ8 204 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 A6NIN4 97 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 M0R233 179 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 KPNA4O00629 521 aaPredicted RBP0.5□□□□□ -2.33
CHD9-211ENST00000564600 CCL25O15444 150 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 KLF7O75840 302 aaPredicted RBP0.5□□□□□ -2.33
CHD9-211ENST00000564600 FABP1P07148 127 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 SMIM6P0DI80 62 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 CXCL8P10145 99 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 BCL2P10415 239 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 CMPK1P30085 196 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 SDC4P31431 198 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 SDC2P34741 201 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 ETV6P41212 452 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 RPL35P42766 123 aaKnown RBP0.5□□□□□ -2.33
CHD9-211ENST00000564600 TAS2R41P59536 307 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 DNAJB13P59910 316 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 RTL8BQ17RB0 113 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 SAMD13Q5VXD3 122 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 TEX261Q6UWH6 196 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 GLIPR1L1Q6UWM5 242 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 ARPINQ7Z6K5 226 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 LRRC18Q8N456 261 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 SMIM20Q8N5G0 67 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 PLPP5Q8NEB5 264 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 COPS9Q8WXC6 57 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 HOPXQ9BPY8 73 aaPredicted RBP0.5□□□□□ -2.33
CHD9-211ENST00000564600 EFCAB11Q9BUY7 163 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 ATG5Q9H1Y0 275 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 TMEM138Q9NPI0 162 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 TNFSF18Q9UNG2 199 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 TPRKBQ9Y3C4 175 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 U3KQ87 197 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 LAMA4Q16363 1823 aa0.5□□□□□ -2.33
CHD9-211ENST00000564600 ARAP1Q96P48 1450 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 VWFP04275 2813 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 COL6A5A8TX70 2615 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 PTPRFP10586 1907 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 GNG14A0A1W2PPG7 69 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 F8W1H4 67 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 RER1O15258 196 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 TRACP01848 142 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 RBP4P02753 201 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 MT-ND6P03923 174 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 FABP2P12104 132 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 COX7CP15954 63 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 HIST1H1BP16401 226 aaKnown RBP0.49□□□□□ -2.33
CHD9-211ENST00000564600 TMBIM6P55061 237 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 DEFA3P59666 94 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 RPS28P62857 69 aaKnown RBP0.49□□□□□ -2.33
CHD9-211ENST00000564600 PSG9Q00887 426 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 EIF3IQ13347 325 aaKnown RBP0.49□□□□□ -2.33
CHD9-211ENST00000564600 MSMO1Q15800 293 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 LTC4SQ16873 150 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 CCDC153Q494R4 210 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 CCSMST1Q4G0I0 132 aa0.49□□□□□ -2.33
CHD9-211ENST00000564600 TMEM128Q5BJH2 165 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms