RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 GNG12Q9UBI6 72 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 PRNDQ9UKY0 176 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 TTC32Q5I0X7 151 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 CARD19Q96LW7 228 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 DOCK7Q96N67 2140 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 PGPA6NDG6 321 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 ARMS2P0C7Q2 107 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 IFITM1P13164 125 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 UCNP55089 124 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 PAX8Q06710 450 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 LY6DQ14210 128 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 SPINK14Q6IE38 97 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 PRORYQ9H606 182 aa14.84□□□□□ -0.03
RAB40C-206ENST00000561781 HEATR1Q9H583 2144 aaKnown RBP14.84□□□□□ -0.03
RAB40C-206ENST00000561781 WI2-2373I1.2A0A1W2PRP0 233 aa14.83□□□□□ -0.04
RAB40C-206ENST00000561781 TMEM158Q8WZ71 300 aa14.83□□□□□ -0.04
RAB40C-206ENST00000561781 OVOL3O00110 214 aa14.83□□□□□ -0.04
RAB40C-206ENST00000561781 PRTN3P24158 256 aa14.83□□□□□ -0.04
RAB40C-206ENST00000561781 ANXA2RQ3ZCQ2 193 aa14.83□□□□□ -0.04
RAB40C-206ENST00000561781 C1orf229Q6ZS94 237 aaPredicted RBP14.83□□□□□ -0.04
RAB40C-206ENST00000561781 HIST1H4GQ99525 98 aa14.83□□□□□ -0.04
RAB40C-206ENST00000561781 U3KQK5 164 aa14.83□□□□□ -0.04
RAB40C-206ENST00000561781 ZNF134P52741 427 aa14.82□□□□□ -0.04
RAB40C-206ENST00000561781 KMT2BQ9UMN6 2715 aaPredicted RBP14.82□□□□□ -0.04
RAB40C-206ENST00000561781 IGKCP01834 107 aa14.82□□□□□ -0.04
RAB40C-206ENST00000561781 EDDM3AQ14507 147 aa14.82□□□□□ -0.04
RAB40C-206ENST00000561781 D6R8Y8 96 aa14.81□□□□□ -0.04
RAB40C-206ENST00000561781 IL4P05112 153 aa14.81□□□□□ -0.04
RAB40C-206ENST00000561781 ZNF493Q6ZR52 646 aa14.81□□□□□ -0.04
RAB40C-206ENST00000561781 RPEQ96AT9 228 aa14.81□□□□□ -0.04
RAB40C-206ENST00000561781 FCN3O75636 299 aa14.81□□□□□ -0.04
RAB40C-206ENST00000561781 C2orf83Q53S99 150 aa14.81□□□□□ -0.04
RAB40C-206ENST00000561781 FAM90A1Q86YD7 464 aa14.81□□□□□ -0.04
RAB40C-206ENST00000561781 ORMDL3Q8N138 153 aa14.81□□□□□ -0.04
RAB40C-206ENST00000561781 TRBV20-1A0A075B6N2 111 aa14.8□□□□□ -0.04
RAB40C-206ENST00000561781 HOXA3O43365 443 aaPredicted RBP14.8□□□□□ -0.04
RAB40C-206ENST00000561781 SNCGO76070 127 aa14.8□□□□□ -0.04
RAB40C-206ENST00000561781 Q6Q795 121 aa14.8□□□□□ -0.04
RAB40C-206ENST00000561781 IFI27L2Q9H2X8 130 aa14.8□□□□□ -0.04
RAB40C-206ENST00000561781 NBASA2RRP1 2371 aa14.8□□□□□ -0.04
RAB40C-206ENST00000561781 CD69Q07108 199 aa14.8□□□□□ -0.04
RAB40C-206ENST00000561781 MORN3Q6PF18 240 aaPredicted RBP14.8□□□□□ -0.04
RAB40C-206ENST00000561781 CEACAM4O75871 244 aa14.79□□□□□ -0.04
RAB40C-206ENST00000561781 FXYD7P58549 80 aa14.79□□□□□ -0.04
RAB40C-206ENST00000561781 LINC01559Q495D7 138 aa14.79□□□□□ -0.04
RAB40C-206ENST00000561781 LYRM7Q5U5X0 104 aa14.79□□□□□ -0.04
RAB40C-206ENST00000561781 MDP1Q86V88 176 aa14.79□□□□□ -0.04
RAB40C-206ENST00000561781 FBXL15Q9H469 300 aa14.79□□□□□ -0.04
RAB40C-206ENST00000561781 PINLYPA6NC86 204 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 LINC01619G3V211 115 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 TCRAP04437 139 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 ASIPP42127 132 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 GTSCR1Q86UQ5 136 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 C11orf53Q8IXP5 236 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 PRR7Q8TB68 274 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 COL12A1Q99715 3063 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 M0QXV9 152 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 FCER1GP30273 86 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 PRCDQ00LT1 54 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 C5orf47Q569G3 176 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 KIR2DL4Q99706 377 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 TMEM126AQ9H061 195 aa14.78□□□□□ -0.04
RAB40C-206ENST00000561781 DPM2O94777 84 aa14.77□□□□□ -0.04
RAB40C-206ENST00000561781 ZC2HC1BQ5TFG8 222 aa14.77□□□□□ -0.04
RAB40C-206ENST00000561781 PATE2Q6UY27 113 aa14.77□□□□□ -0.04
RAB40C-206ENST00000561781 OR1L8Q8NGR8 309 aa14.77□□□□□ -0.04
RAB40C-206ENST00000561781 SRSF12Q8WXF0 261 aaKnown RBP14.77□□□□□ -0.04
RAB40C-206ENST00000561781 RAB9BQ9NP90 201 aa14.77□□□□□ -0.04
RAB40C-206ENST00000561781 OBP2BQ9NPH6 170 aa14.77□□□□□ -0.04
RAB40C-206ENST00000561781 COL6A6A6NMZ7 2263 aa14.77□□□□□ -0.04
RAB40C-206ENST00000561781 TRBV7-3A0A075B6L6 115 aa14.77□□□□□ -0.05
RAB40C-206ENST00000561781 PLAUP00749 431 aa14.77□□□□□ -0.05
RAB40C-206ENST00000561781 PSMB2P49721 201 aa14.77□□□□□ -0.05
RAB40C-206ENST00000561781 ATP5J2P56134 94 aa14.77□□□□□ -0.05
RAB40C-206ENST00000561781 TWIST1Q15672 202 aa14.77□□□□□ -0.05
RAB40C-206ENST00000561781 UTF1Q5T230 341 aa14.77□□□□□ -0.05
RAB40C-206ENST00000561781 PTH2Q96A98 100 aa14.77□□□□□ -0.05
RAB40C-206ENST00000561781 AGRNO00468 2067 aa14.76□□□□□ -0.05
RAB40C-206ENST00000561781 SCGB2A1O75556 95 aa14.76□□□□□ -0.05
RAB40C-206ENST00000561781 FSTL3O95633 263 aa14.76□□□□□ -0.05
RAB40C-206ENST00000561781 Q86TA4 180 aa14.76□□□□□ -0.05
RAB40C-206ENST00000561781 PPDPFQ9H3Y8 114 aa14.76□□□□□ -0.05
RAB40C-206ENST00000561781 RP1L1Q8IWN7 2480 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-206ENST00000561781 SVILO95425 2214 aa14.76□□□□□ -0.05
RAB40C-206ENST00000561781 LEAP2Q969E1 77 aa14.76□□□□□ -0.05
RAB40C-206ENST00000561781 TNCP24821 2201 aa14.76□□□□□ -0.05
RAB40C-206ENST00000561781 PRR30Q53SZ7 412 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-206ENST00000561781 FAM104BQ5XKR9 115 aa14.75□□□□□ -0.05
RAB40C-206ENST00000561781 FAM159AQ6UWV7 190 aa14.75□□□□□ -0.05
RAB40C-206ENST00000561781 RBMXL3Q8N7X1 1067 aaKnown RBP14.75□□□□□ -0.05
RAB40C-206ENST00000561781 A8MWV9 139 aa14.75□□□□□ -0.05
RAB40C-206ENST00000561781 PRSS1P07477 247 aa14.75□□□□□ -0.05
RAB40C-206ENST00000561781 LOXL3P58215 753 aa14.75□□□□□ -0.05
RAB40C-206ENST00000561781 TBC1D28Q2M2D7 210 aa14.75□□□□□ -0.05
RAB40C-206ENST00000561781 LINC00305Q7Z4B0 112 aa14.75□□□□□ -0.05
RAB40C-206ENST00000561781 CIARTQ8N365 385 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-206ENST00000561781 RNASE2P10153 161 aaKnown RBP14.74□□□□□ -0.05
RAB40C-206ENST00000561781 PPP1R27Q86WC6 154 aa14.74□□□□□ -0.05
RAB40C-206ENST00000561781 WFDC3Q8IUB2 231 aa14.74□□□□□ -0.05
RAB40C-206ENST00000561781 SBSPONQ8IVN8 264 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms