RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 NDUFC2O95298 119 aa-0.14□□□□□ -2.43
USP8-218ENST00000561330 CTXN2P0C2S0 81 aa-0.14□□□□□ -2.43
USP8-218ENST00000561330 RPL37AP61513 92 aaKnown RBP-0.14□□□□□ -2.43
USP8-218ENST00000561330 CASC2Q6XLA1 102 aa-0.14□□□□□ -2.43
USP8-218ENST00000561330 LYG2Q86SG7 212 aa-0.14□□□□□ -2.43
USP8-218ENST00000561330 LIMD2Q9BT23 127 aa-0.14□□□□□ -2.43
USP8-218ENST00000561330 MAP1LC3BQ9GZQ8 125 aa-0.14□□□□□ -2.43
USP8-218ENST00000561330 TTC28Q96AY4 2481 aa-0.14□□□□□ -2.43
USP8-218ENST00000561330 FRMPD1Q5SYB0 1578 aa-0.15□□□□□ -2.43
USP8-218ENST00000561330 WNK2Q9Y3S1 2297 aa-0.15□□□□□ -2.43
USP8-218ENST00000561330 DSTQ03001 7570 aaKnown RBP-0.15□□□□□ -2.43
USP8-218ENST00000561330 RER1O15258 196 aa-0.15□□□□□ -2.43
USP8-218ENST00000561330 LYRM1O43325 122 aa-0.15□□□□□ -2.43
USP8-218ENST00000561330 LY6G6CO95867 125 aa-0.15□□□□□ -2.43
USP8-218ENST00000561330 INSL3P51460 131 aa-0.15□□□□□ -2.43
USP8-218ENST00000561330 MIR22HGQ0VDD5 57 aa-0.15□□□□□ -2.43
USP8-218ENST00000561330 OR2J1Q9GZK6 312 aa-0.15□□□□□ -2.43
USP8-218ENST00000561330 ANK2Q01484 3957 aa-0.15□□□□□ -2.43
USP8-218ENST00000561330 ABCA1O95477 2261 aa-0.16□□□□□ -2.43
USP8-218ENST00000561330 TRAV5A0A0B4J249 113 aa-0.16□□□□□ -2.44
USP8-218ENST00000561330 SCGB2B2Q4G0G5 96 aa-0.16□□□□□ -2.44
USP8-218ENST00000561330 FOXI2Q6ZQN5 318 aa-0.16□□□□□ -2.44
USP8-218ENST00000561330 ARMC1Q9NVT9 282 aa-0.16□□□□□ -2.44
USP8-218ENST00000561330 TANC2Q9HCD6 1990 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 ESPL1Q14674 2120 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 HIVEP3Q5T1R4 2406 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 A0A0J9YY99 117 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 ODAMA1E959 279 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 PRORSD1PA6NEY8 169 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 K7ERJ3 54 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 AIPO00170 330 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 IFNA14P01570 189 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 IDO1P14902 403 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 PDE6GP18545 87 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 Q5BKY6 102 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 C10orf99Q6UWK7 81 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 C10orf111Q8N326 155 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 PHB2Q99623 299 aa-0.17□□□□□ -2.44
USP8-218ENST00000561330 AFDNP55196 1824 aaKnown RBP-0.17□□□□□ -2.44
USP8-218ENST00000561330 A6NN06 94 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 G3V2T6 193 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 HIST1H2BKO60814 126 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 TRGC2P03986 189 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 HIST1H2BJP06899 126 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 CAV3P56539 151 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 SPINK13Q1W4C9 94 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 LPAR5Q9H1C0 372 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 PYCARDQ9ULZ3 195 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 ASB4Q9Y574 426 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 CAMSAP1Q5T5Y3 1602 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 ANK1P16157 1881 aa-0.18□□□□□ -2.44
USP8-218ENST00000561330 MYH2Q9UKX2 1941 aa-0.19□□□□□ -2.44
USP8-218ENST00000561330 PIEZO1Q92508 2521 aa-0.19□□□□□ -2.44
USP8-218ENST00000561330 UHRF1BP1Q6BDS2 1440 aa-0.19□□□□□ -2.44
USP8-218ENST00000561330 SULT1C4O75897 302 aa-0.19□□□□□ -2.44
USP8-218ENST00000561330 VMA21Q3ZAQ7 101 aa-0.19□□□□□ -2.44
USP8-218ENST00000561330 C5orf17Q8NAS9 161 aa-0.19□□□□□ -2.44
USP8-218ENST00000561330 MALSU1Q96EH3 234 aa-0.19□□□□□ -2.44
USP8-218ENST00000561330 CST11Q9H112 138 aa-0.19□□□□□ -2.44
USP8-218ENST00000561330 UNC79Q9P2D8 2635 aa-0.19□□□□□ -2.44
USP8-218ENST00000561330 KDM6BO15054 1643 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 CD109Q6YHK3 1445 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 CAMSAP2Q08AD1 1489 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 ABCA2Q9BZC7 2435 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 RPS3P23396 243 aaKnown RBP eCLIP-0.2□□□□□ -2.44
USP8-218ENST00000561330 REEP5Q00765 189 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 DIAPH2-AS1Q14236 149 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 NEDD8Q15843 81 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 ZNF56Q15929 161 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 GLYATL3Q5SZD4 288 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 ANGPTL5Q86XS5 388 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 FAM216BQ8N7L0 139 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 PLEKHB2Q96CS7 222 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 DGCR14Q96DF8 476 aaKnown RBP-0.2□□□□□ -2.44
USP8-218ENST00000561330 PROK2Q9HC23 129 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 NAT8BQ9UHF3 227 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 SPAG17Q6Q759 2223 aa-0.2□□□□□ -2.44
USP8-218ENST00000561330 ADGRL3Q9HAR2 1447 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 MED13LQ71F56 2210 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 HMCN2Q8NDA2 5059 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 A0A1W2PRS3 328 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 RIIAD1A6NNX1 92 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 IFNA6P05013 189 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 OGNP20774 298 aaKnown RBP-0.21□□□□□ -2.44
USP8-218ENST00000561330 RPL37P61927 97 aaKnown RBP-0.21□□□□□ -2.44
USP8-218ENST00000561330 GNG5P63218 68 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 FADDQ13158 208 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 MSMO1Q15800 293 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 ASB16-AS1Q495Z4 193 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 FAM213BQ8TBF2 198 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 AP1S3Q96PC3 154 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 GPX7Q96SL4 187 aaPredicted RBP-0.21□□□□□ -2.44
USP8-218ENST00000561330 PRNDQ9UKY0 176 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 U3KQA8 63 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 CADP27708 2225 aa-0.21□□□□□ -2.44
USP8-218ENST00000561330 H7C1C5 153 aa-0.22□□□□□ -2.44
USP8-218ENST00000561330 FXYD1O00168 92 aa-0.22□□□□□ -2.44
USP8-218ENST00000561330 APOA2P02652 100 aa-0.22□□□□□ -2.44
USP8-218ENST00000561330 SNRPD3P62318 126 aaKnown RBP-0.22□□□□□ -2.44
USP8-218ENST00000561330 LCN6P62502 163 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms