RNA–Protein interactions for RNA: ENST00000558843.5

COPS2-205, Transcript of COP9 signalosome subunit 2, human

TSL 1 (best)

Gene COPS2, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS2-205	ENST00000558843	DUXB	A0A1W2PPF3	345 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843		E7EUB6	86 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	GABARAP	H6UMI1	98 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843		M0R378	163 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	KPNA4	O00629	521 aa	Predicted RBP	0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	IGLV3-1	P01715	115 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	TRGC2	P03986	189 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	IFNA4	P05014	189 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	HMGN1	P05114	100 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	OR10J4	P0C629	311 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	OGN	P20774	298 aa	Known RBP	0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	SDC4	P31431	198 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	S100A11	P31949	105 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	RAB5C	P51148	216 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	POLR2H	P52434	150 aa	Known RBP	0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	TMBIM6	P55061	237 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	ARPP19	P56211	112 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	NDUFA6	P56556	154 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	ROMO1	P60602	79 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	CKS1B	P61024	79 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	LSM3	P62310	102 aa	Known RBP	0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	S100A12	P80511	92 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	OR8B8	Q15620	311 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	TOMM20L	Q6UXN7	152 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	LRRC18	Q8N456	261 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	TMEM35B	Q8NCS4	154 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	OR9Q1	Q8NGQ5	310 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	PPTC7	Q8NI37	304 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	THEM6	Q8WUY1	208 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	PSMF1	Q92530	271 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	ISOC1	Q96CN7	298 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	PLEKHB2	Q96CS7	222 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	BORCS8	Q96FH0	119 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	TEX37	Q96LM6	180 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	CACYBP	Q9HB71	228 aa	Known RBP	0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	TAF9B	Q9HBM6	251 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	NIT2	Q9NQR4	276 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	OTOR	Q9NRC9	128 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	JPT1	Q9UK76	154 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	LAMTOR2	Q9Y2Q5	125 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	RNF11	Q9Y3C5	154 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	RP1	P56715	2156 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	MED12L	Q86YW9	2145 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	SCN3A	Q9NY46	2000 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	MYH9	P35579	1960 aa	Known RBP	0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	EXPH5	Q8NEV8	1989 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	SCN8A	Q9UQD0	1980 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	FER1L6	Q2WGJ9	1857 aa		0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	ARHGEF28	Q8N1W1	1705 aa	Known RBP	0.5	□□□□□ -2.33
COPS2-205	ENST00000558843	SYNJ1	O43426	1573 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	PEG3	Q9GZU2	1588 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	CEP164	Q9UPV0	1460 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	CD109	Q6YHK3	1445 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	TRAV36DV7	A0A075B6V5	113 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	LOC107984640	A0A0U1RRK4	108 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843		A0A1B0GV90	55 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	TRDV1	A0A1B0GX56	115 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843		B4DSR2	109 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	C5orf58	C9J3I9	102 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843		J3KT08	172 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843		M0QZK8	103 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843		M0R233	179 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	DEGS1	O15121	323 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	NDUFA2	O43678	99 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	CST7	O76096	145 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	MT-ND4L	P03901	98 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	DBI	P07108	87 aa	Known RBP	0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	CXCL8	P10145	99 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	SCGB1A1	P11684	91 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	FABP2	P12104	132 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	HLA-E	P13747	358 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	COX7C	P15954	63 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	RPL35	P42766	123 aa	Known RBP	0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	DYNLT3	P51808	116 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	CDK6	Q00534	326 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	RTL8B	Q17RB0	113 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	SMIM21	Q3B7S5	101 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	C1orf140	Q5VVS0	124 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843		Q5XG85	94 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	KRTAP19-3	Q7Z4W3	81 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	PRR15	Q8IV56	129 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	TEX29	Q8N6K0	151 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	OR8J3	Q8NGG0	315 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	OR5D16	Q8NGK9	328 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	BRK1	Q8WUW1	75 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	MAGOHB	Q96A72	148 aa	Known RBP	0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	ZNF714	Q96N38	554 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	TSC22D3	Q99576	134 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	RTL8A	Q9BWD3	113 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	NPCDR1	Q9BY65	106 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	POPDC3	Q9HBV1	291 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	MED31	Q9Y3C7	131 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	NUP98	P52948	1817 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	LAMA4	Q16363	1823 aa		0.49	□□□□□ -2.33
COPS2-205	ENST00000558843	ZFC3H1	O60293	1989 aa	Known RBP	0.48	□□□□□ -2.33
COPS2-205	ENST00000558843	ERCC6	Q03468	1493 aa		0.48	□□□□□ -2.33
COPS2-205	ENST00000558843	ARAP1	Q96P48	1450 aa		0.48	□□□□□ -2.33
COPS2-205	ENST00000558843	MYH7	P12883	1935 aa		0.48	□□□□□ -2.33
COPS2-205	ENST00000558843	BCL9	O00512	1426 aa		0.48	□□□□□ -2.33

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