RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 NPFFR1Q9GZQ6 430 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 PCNX1Q96RV3 2341 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 SMKR1H3BMG3 65 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 NBR2O15453 112 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 NDUFS7O75251 213 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 SAP30O75446 220 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 BMI1P35226 326 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 MAP1BP46821 2468 aaKnown RBP9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 MFAP4P55083 255 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 GFRALQ6UXV0 394 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 PRR25Q96S07 402 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 JKAMPQ9P055 326 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 S4R3C0 116 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 IGKV2-40A0A087WW87 121 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 IGKV2D-40P01614 121 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 EGR2P11161 476 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 PSMG4Q5JS54 123 aa9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 BCL6BQ8N143 479 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 SH3BGRL2Q9UJC5 107 aa9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 CNOT1A5YKK6 2376 aaKnown RBP9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 RPL7P18124 248 aaKnown RBP9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 KLF17Q5JT82 389 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 PCP2Q8IVA1 136 aa9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 RAB37Q96AX2 223 aa9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 ZNF48Q96MX3 618 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 NAA38Q9BRA0 125 aaKnown RBP9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 MAP1LC3AQ9H492 121 aa9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 BOD1L1Q8NFC6 3051 aa9.25□□□□□ -0.93
VIPAS39-211ENST00000557658 B9A039 149 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 OR5A1Q8NGJ0 315 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 ABHD17AQ96GS6 310 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 DKK2Q9UBU2 259 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 SMG1Q96Q15 3661 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 ASPMQ8IZT6 3477 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 A0A1W2PPM0 123 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 LYNX1G3V0Z9 82 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 IGLC6P0CF74 106 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 LYNX1P0DP58 116 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 PIFOQ8TCI5 191 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 ONECUT1Q9UBC0 465 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 CFAP47Q6ZTR5 3102 aa9.24□□□□□ -0.93
VIPAS39-211ENST00000557658 G3V4G9 280 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 IGLV11-55A0A075B6I3 123 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 A0A1W2PRD5 423 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 A0A1W2PRF3 423 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 A0A1W2PRM7 423 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 NPIPB5A8MRT5 1133 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 NDUFA3O95167 84 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 PRSS57Q6UWY2 283 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 WFDC3Q8IUB2 231 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 NPBQ8NG41 125 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 FANCD2OSQ96PS1 177 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 DPM3Q9P2X0 92 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 SPCS1Q9Y6A9 102 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 CACNA1HO95180 2353 aa9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 TPRP12270 2363 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 EP300Q09472 2414 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-211ENST00000557658 FABP2P12104 132 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 ZNF80P51504 273 aaPredicted RBP9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 SRSF2Q01130 221 aaKnown RBP9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 Q8TAT8 98 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 C18orf15Q96N68 181 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 OTOGLQ3ZCN5 2332 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 SMIM13P0DJ93 91 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 FCER1GP30273 86 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 CEACAM3P40198 252 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 RIPPLY3P57055 190 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 NEGR1Q7Z3B1 354 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 NXT2Q9NPJ8 142 aaKnown RBP9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 C21orf62Q9NYP8 219 aa9.22□□□□□ -0.93
VIPAS39-211ENST00000557658 LINC01546A6NGU7 62 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 SCGB2A1O75556 95 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 ORM1P02763 201 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 CD3EP07766 207 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 LEPP41159 167 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 C5orf64Q2M2E5 130 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 CFHR4Q92496 578 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 RNF185Q96GF1 192 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 VGLL1Q99990 258 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 HIGD1BQ9P298 99 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 SELENOKQ9Y6D0 94 aa9.21□□□□□ -0.93
VIPAS39-211ENST00000557658 F8W735 103 aaPredicted RBP9.21□□□□□ -0.94
VIPAS39-211ENST00000557658 HES1Q14469 280 aa9.21□□□□□ -0.94
VIPAS39-211ENST00000557658 LINC01559Q495D7 138 aa9.21□□□□□ -0.94
VIPAS39-211ENST00000557658 ZMAT4Q9H898 229 aa9.21□□□□□ -0.94
VIPAS39-211ENST00000557658 POLEQ07864 2286 aa9.21□□□□□ -0.94
VIPAS39-211ENST00000557658 FABP5P3A8MUU1 101 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 PRSS1P07477 247 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 ODF1Q14990 250 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 CNFNQ9BYD5 112 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 MSRB1Q9NZV6 116 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 ZNF318Q5VUA4 2279 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 GCSHP23434 173 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 S100A7P31151 101 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 TM4SF20Q53R12 229 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 SAMD5Q5TGI4 173 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 TTC9CQ8N5M4 171 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 LY6G5BQ8NDX9 201 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 OR11H6Q8NGC7 330 aa9.2□□□□□ -0.94
VIPAS39-211ENST00000557658 ARPC1AQ92747 370 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms