RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, human

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPHN-213	ENST00000556501	CT45A10	P0DMU9	189 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	SAA4	P35542	130 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	CSN1S1	P47710	185 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	NUTF2	P61970	127 aa	Known RBP	4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	RIG	Q13278	110 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	LY6D	Q14210	128 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	PMCHL1	Q16048	86 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	SPATA45	Q537H7	98 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	EBLN2	Q6P2I7	272 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	NDFIP1	Q9BT67	221 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	KRTAP4-6	Q9BYQ5	205 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	RABAC1	Q9UI14	185 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	CHD6	Q8TD26	2715 aa		4.2	□□□□□ -1.74
GPHN-213	ENST00000556501	SPTBN1	Q01082	2364 aa	Known RBP	4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	FLNC	Q14315	2725 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	COL6A6	A6NMZ7	2263 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	IGHV1-24	A0A0C4DH33	117 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	CENPVL3	A0A0U1RRI6	287 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	NPFF	O15130	113 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	ATP6V0E1	O15342	81 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	GOSR1	O95249	250 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	IGKV2D-40	P01614	121 aa	Predicted RBP	4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	IGHV3-23	P01764	117 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	OR5AL1	P0C617	328 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	RNF224	P0DH78	156 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	IGLC3	P0DOY3	106 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	BTF3	P20290	206 aa	Known RBP	4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	GPR183	P32249	361 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	CRIP1	P50238	77 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	RAB9A	P51151	201 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	CRIP2	P52943	208 aa	Predicted RBP	4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	RHOG	P84095	191 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	SAPCD1	Q5SSQ6	148 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	UNQ5815/PRO19632	Q6UWF5	114 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	ZNF493	Q6ZR52	646 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	KLHDC1	Q8N7A1	406 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	C8orf49	Q96NF6	230 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	ATP6V0B	Q99437	205 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	BPESC1	Q9GZL8	116 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	CLEC5A	Q9NY25	188 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	UQCR10	Q9UDW1	63 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	SMAD5-AS1	Q9Y6J3	95 aa		4.19	□□□□□ -1.74
GPHN-213	ENST00000556501	TRAV9-2	A0A087WT02	112 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	TMEM189	A5PLL7	270 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	RBAKDN	A6NC62	111 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	C19orf84	I3L1E1	186 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	ZNF561-AS1	K7EIQ3	104 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501		M0QZ24	198 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	TCAP	O15273	167 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	CRX	O43186	299 aa	Predicted RBP	4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	IGHV4-39	P01824	125 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	IGHG4	P01861	327 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	GNLY	P22749	145 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	UQCRFS1	P47985	274 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	RPS20	P60866	119 aa	Known RBP	4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	SRSF2	Q01130	221 aa	Known RBP	4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	ECSCR	Q19T08	205 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	C15orf32	Q32M92	178 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	C19orf54	Q5BKX5	351 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	PRR31	Q5SQ13	230 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	LCN12	Q6JVE5	192 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	SPATA12	Q7Z6I5	190 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	C5orf56	Q8N8D9	126 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	PRR25	Q96S07	402 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	ASCL2	Q99929	193 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	SLC50A1	Q9BRV3	221 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	TMEM70	Q9BUB7	260 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	CDIP1	Q9H305	208 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	MOB4	Q9Y3A3	225 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501		U3KQK5	164 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	WNK2	Q9Y3S1	2297 aa		4.18	□□□□□ -1.74
GPHN-213	ENST00000556501	TRBV7-1	A0A0A6YYK4	115 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	IGHV1-69D	A0A0B4J2H0	117 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	CLPSL1	A2RUU4	121 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	FAM223B	A6NKX1	122 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	SYS1-DBNDD2	H3BUS1	97 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	IGHV1-69	P01742	117 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	LINC00614	P0C842	121 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	IGLC6	P0CF74	106 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	PRB4	P10163	310 aa	Predicted RBP	4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	BMI1	P35226	326 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	HNRNPA3	P51991	378 aa	Known RBP	4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	REL	Q04864	619 aa	Predicted RBP	4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	PAX8	Q06710	450 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	LYZL1	Q6UWQ5	148 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	PET117	Q6UWS5	81 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	LINC00173	Q6ZV60	143 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	FAM223A	Q8IWN6	122 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	ATOH7	Q8N100	152 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501		Q8TAT8	98 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	EEF1AKMT3	Q96AZ1	226 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	MRPL53	Q96EL3	112 aa	Known RBP	4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	VGLL1	Q99990	258 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	PIMREG	Q9BSJ6	248 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	FAM208B	Q5VWN6	2430 aa		4.17	□□□□□ -1.74
GPHN-213	ENST00000556501	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms