RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 SFT2D1Q8WV19 159 aa1.36□□□□□ -2.19
CDKN3-210ENST00000556305 YPEL2Q96QA6 119 aa1.36□□□□□ -2.19
CDKN3-210ENST00000556305 CNTLNQ9NXG0 1405 aa1.36□□□□□ -2.19
CDKN3-210ENST00000556305 OPTCQ9UBM4 332 aa1.36□□□□□ -2.19
CDKN3-210ENST00000556305 MED13Q9UHV7 2174 aa1.36□□□□□ -2.19
CDKN3-210ENST00000556305 BAZ2BQ9UIF8 2168 aaKnown RBP1.36□□□□□ -2.19
CDKN3-210ENST00000556305 KLK9Q9UKQ9 250 aa1.36□□□□□ -2.19
CDKN3-210ENST00000556305 UTP11Q9Y3A2 253 aaKnown RBP1.36□□□□□ -2.19
CDKN3-210ENST00000556305 HECW1Q76N89 1606 aa1.36□□□□□ -2.19
CDKN3-210ENST00000556305 DMBT1Q9UGM3 2413 aaPredicted RBP1.36□□□□□ -2.19
CDKN3-210ENST00000556305 MROH2AA6NES4 1674 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 PBRM1Q86U86 1689 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 TOPAZ1Q8N9V7 1692 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 AGLP35573 1532 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
CDKN3-210ENST00000556305 ARHGEF5Q12774 1597 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 ANAPC1Q9H1A4 1944 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 SCN11AQ9UI33 1791 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 C2orf70A6NJV1 201 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 GEMIN2O14893 280 aaKnown RBP1.35□□□□□ -2.19
CDKN3-210ENST00000556305 RNASE3P12724 160 aaKnown RBP1.35□□□□□ -2.19
CDKN3-210ENST00000556305 SSR2P43308 183 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 PDE6HQ13956 83 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 RNASE10Q5GAN6 216 aaKnown RBP1.35□□□□□ -2.19
CDKN3-210ENST00000556305 BRMS1LQ5PSV4 323 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 OR10J5Q8NHC4 309 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 CEP19Q96LK0 163 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 C9orf16Q9BUW7 83 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 IMUPQ9GZP8 106 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 C6orf62Q9GZU0 229 aaPredicted RBP1.35□□□□□ -2.19
CDKN3-210ENST00000556305 ACER3Q9NUN7 267 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 RASL12Q9NYN1 266 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 ARL5AQ9Y689 179 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 ARHGAP35Q9NRY4 1499 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 INTS1Q8N201 2190 aaKnown RBP1.35□□□□□ -2.19
CDKN3-210ENST00000556305 UGGT2Q9NYU1 1516 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 MYOFQ9NZM1 2061 aa1.35□□□□□ -2.19
CDKN3-210ENST00000556305 MGAQ8IWI9 3026 aa1.34□□□□□ -2.19
CDKN3-210ENST00000556305 ADAMTS12P58397 1594 aa1.34□□□□□ -2.19
CDKN3-210ENST00000556305 DNMBPQ6XZF7 1577 aa1.34□□□□□ -2.19
CDKN3-210ENST00000556305 RNF213Q63HN8 5207 aa1.34□□□□□ -2.19
CDKN3-210ENST00000556305 SMG6Q86US8 1419 aaKnown RBP1.34□□□□□ -2.19
CDKN3-210ENST00000556305 SONP18583 2426 aaKnown RBP1.34□□□□□ -2.19
CDKN3-210ENST00000556305 TRBV19A0A075B6N1 114 aa1.34□□□□□ -2.19
CDKN3-210ENST00000556305 TRGV10A0A0A0MS01 117 aa1.34□□□□□ -2.19
CDKN3-210ENST00000556305 IFNA7P01567 189 aa1.34□□□□□ -2.19
CDKN3-210ENST00000556305 KRR1Q13601 381 aaKnown RBP1.34□□□□□ -2.19
CDKN3-210ENST00000556305 ESRGQ1W209 222 aa1.34□□□□□ -2.19
CDKN3-210ENST00000556305 DGCR14Q96DF8 476 aaKnown RBP1.34□□□□□ -2.19
CDKN3-210ENST00000556305 SSPOA2VEC9 5147 aa1.34□□□□□ -2.2
CDKN3-210ENST00000556305 SSC5DA1L4H1 1573 aa1.34□□□□□ -2.2
CDKN3-210ENST00000556305 HEATR5BQ9P2D3 2071 aa1.33□□□□□ -2.2
CDKN3-210ENST00000556305 FAM159BA6NKW6 160 aa1.33□□□□□ -2.2
CDKN3-210ENST00000556305 PIGPP57054 158 aa1.33□□□□□ -2.2
CDKN3-210ENST00000556305 ARF6P62330 175 aa1.33□□□□□ -2.2
CDKN3-210ENST00000556305 BCL2L15Q5TBC7 163 aa1.33□□□□□ -2.2
CDKN3-210ENST00000556305 GOLT1AQ6ZVE7 132 aa1.33□□□□□ -2.2
CDKN3-210ENST00000556305 WFDC5Q8TCV5 224 aa1.33□□□□□ -2.2
CDKN3-210ENST00000556305 C14orf132Q9NPU4 83 aa1.33□□□□□ -2.2
CDKN3-210ENST00000556305 SAMD9Q5K651 1589 aa1.33□□□□□ -2.2
CDKN3-210ENST00000556305 TECTAO75443 2155 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 UACAQ9BZF9 1416 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 SPTBN1Q01082 2364 aaKnown RBP1.32□□□□□ -2.2
CDKN3-210ENST00000556305 TRAV12-1A0A0B4J245 112 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 TRAV4A0A0B4J268 109 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 CLDN25C9JDP6 229 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 HMGB3O15347 200 aaKnown RBP1.32□□□□□ -2.2
CDKN3-210ENST00000556305 DEFA3P59666 94 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 HSPE1P61604 102 aaKnown RBP1.32□□□□□ -2.2
CDKN3-210ENST00000556305 BASP1P80723 227 aaKnown RBP1.32□□□□□ -2.2
CDKN3-210ENST00000556305 RRN3P1Q2M238 152 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 LINC00301Q8NCQ3 95 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 ODF3Q96PU9 254 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 LINC00467Q9BRT7 94 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 BCL2L10Q9HD36 194 aa1.32□□□□□ -2.2
CDKN3-210ENST00000556305 LAMA1P25391 3075 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 ERVK-7P63135 1459 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 APC2O95996 2303 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 ZNF93P35789 620 aaPredicted RBP1.31□□□□□ -2.2
CDKN3-210ENST00000556305 CAPZBP47756 277 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 MYL5Q02045 173 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 SLC30A7Q8NEW0 376 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 SLAMF6Q96DU3 332 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 ADAT3Q96EY9 351 aaPredicted RBP1.31□□□□□ -2.2
CDKN3-210ENST00000556305 PRADC1Q9BSG0 188 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 TMEM133Q9H2Q1 129 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 ARMC1Q9NVT9 282 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 MICAL3Q7RTP6 2002 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 DOCK3Q8IZD9 2030 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 LRRC37A2A6NM11 1700 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 ARFGEF3Q5TH69 2177 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 VPS13CQ709C8 3753 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 HFM1A2PYH4 1435 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 PPIP5K1Q6PFW1 1433 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 ADGRL3Q9HAR2 1447 aa1.31□□□□□ -2.2
CDKN3-210ENST00000556305 ZNF106Q9H2Y7 1883 aaKnown RBP1.31□□□□□ -2.2
CDKN3-210ENST00000556305 NKTRP30414 1462 aaKnown RBP1.31□□□□□ -2.2
CDKN3-210ENST00000556305 PLXND1Q9Y4D7 1925 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 LMTK2Q8IWU2 1503 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 TRBV6-7A0A0A0MS04 114 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms