RNA–Protein interactions for RNA: ENST00000548918.1

TMCC3-202, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 2

Gene TMCC3, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-202ENST00000548918 PTPRSQ13332 1948 aa2.83□□□□□ -1.96
TMCC3-202ENST00000548918 FBN1P35555 2871 aaKnown RBP2.82□□□□□ -1.96
TMCC3-202ENST00000548918 NOTCH3Q9UM47 2321 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 FAM208AQ9UK61 1670 aaKnown RBP2.82□□□□□ -1.96
TMCC3-202ENST00000548918 BOD1L1Q8NFC6 3051 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 DOCK4Q8N1I0 1966 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 IGKV2-28A0A075B6P5 120 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 ATP6V1G2-DDX39BF2Z307 99 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 IGKV2D-28P01615 120 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 FKBP2P26885 142 aaKnown RBP2.82□□□□□ -1.96
TMCC3-202ENST00000548918 POLR2HP52434 150 aaKnown RBP2.82□□□□□ -1.96
TMCC3-202ENST00000548918 HIST1H4AP62805 103 aaKnown RBP2.82□□□□□ -1.96
TMCC3-202ENST00000548918 C3orf62Q6ZUJ4 267 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 MBD3L1Q8WWY6 194 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 DOHHQ9BU89 302 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 CCDC32Q9BV29 185 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 OR2J1Q9GZK6 312 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 SLC39A9Q9NUM3 307 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 TXNL4BQ9NX01 149 aaKnown RBP2.82□□□□□ -1.96
TMCC3-202ENST00000548918 CELSR1Q9NYQ6 3014 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 SEC16AO15027 2179 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 CACNA1EQ15878 2313 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 ANKARQ7Z5J8 1434 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 LAMA1P25391 3075 aa2.82□□□□□ -1.96
TMCC3-202ENST00000548918 MYH7BA7E2Y1 1941 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 MYO7AQ13402 2215 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 RTTNQ86VV8 2226 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 USP9YO00507 2555 aaPredicted RBP2.81□□□□□ -1.96
TMCC3-202ENST00000548918 IGLV2-18A0A075B6J9 118 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 A0A1W2PNM2 257 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 IRGMA1A4Y4 181 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 LINC00587B1AMM8 73 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 TP53I11O14683 189 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 OR2T1O43869 369 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 CDS2O95674 445 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 NFYBP25208 207 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 SDC4P31431 198 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 C4orf22Q6V702 233 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 ANGPTL5Q86XS5 388 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 OR8D4Q8NGM9 314 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 PFN4Q8NHR9 129 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 C1orf54Q8WWF1 131 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 TCEAL7Q9BRU2 100 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 C2orf88Q9BSF0 95 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 OTORQ9NRC9 128 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 SPANXCQ9NY87 97 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 DAPK1P53355 1430 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 CPSF1Q10570 1443 aaKnown RBP2.81□□□□□ -1.96
TMCC3-202ENST00000548918 ECM29Q5VYK3 1845 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 SCN9AQ15858 1988 aa2.81□□□□□ -1.96
TMCC3-202ENST00000548918 PRRC2AP48634 2157 aaKnown RBP2.81□□□□□ -1.96
TMCC3-202ENST00000548918 SPENQ96T58 3664 aaKnown RBP2.8□□□□□ -1.96
TMCC3-202ENST00000548918 NIPBLQ6KC79 2804 aaeCLIP2.8□□□□□ -1.96
TMCC3-202ENST00000548918 ANKHD1Q8IWZ3 2542 aaKnown RBP2.8□□□□□ -1.96
TMCC3-202ENST00000548918 DDX60Q8IY21 1712 aaKnown RBP2.8□□□□□ -1.96
TMCC3-202ENST00000548918 TMEM235A6NFC5 223 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 FAM25AB3EWG3 89 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 FAM25CB3EWG5 89 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 FAM25GB3EWG6 89 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 TMEM256-PLSCR3K7ERE1 68 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 RTL8CO15255 209 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 TPST1O60507 370 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 APOA2P02652 100 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 TRGC2P03986 189 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 CSRP1P21291 193 aaKnown RBP2.8□□□□□ -1.96
TMCC3-202ENST00000548918 SMIM21Q3B7S5 101 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 LHFPL1Q86WI0 220 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 DYNAPQ8N1N2 210 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 OR9Q1Q8NGQ5 310 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 CYYR1Q96J86 154 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 TEX37Q96LM6 180 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 LINC00167Q96N53 147 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 HSPB9Q9BQS6 159 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 TPT1P8Q9HAU6 139 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 RASL12Q9NYN1 266 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 RNF11Q9Y3C5 154 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 MED13LQ71F56 2210 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 HEATR5AQ86XA9 2040 aa2.8□□□□□ -1.96
TMCC3-202ENST00000548918 SHANK1Q9Y566 2161 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 TRGV5A0A0B4J1U4 118 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 A0A0J9YX75 114 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 ODAMA1E959 279 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 ARL5CA6NH57 179 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 PGLYRP1O75594 196 aaPredicted RBP2.79□□□□□ -1.96
TMCC3-202ENST00000548918 S100A4P26447 101 aaKnown RBP2.79□□□□□ -1.96
TMCC3-202ENST00000548918 OR8B8Q15620 311 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 LYZL1Q6UWQ5 148 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 MIR17HGQ75NE6 70 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 C3orf56Q8N813 242 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 OR8J3Q8NGG0 315 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 TMEM203Q969S6 136 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 C12orf57Q99622 126 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 VPS25Q9BRG1 176 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 OSTCQ9NRP0 149 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 MRPL16Q9NX20 251 aaKnown RBP2.79□□□□□ -1.96
TMCC3-202ENST00000548918 TRAPPC2LQ9UL33 140 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 LRRC37AA6NMS7 1700 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 COL6A6A6NMZ7 2263 aa2.79□□□□□ -1.96
TMCC3-202ENST00000548918 GREB1Q4ZG55 1949 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms