RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 HLA-DMBP28068 263 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 LDLRAD2Q5SZI1 272 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 RASL11AQ6T310 242 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 CHCHD1Q96BP2 118 aaKnown RBP10.28□□□□□ -0.76
PTPN21-202ENST00000536337 HIVEP3Q5T1R4 2406 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 A1L4Q6 167 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 SRD5A1P18405 259 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 PSG3Q16557 428 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 VMO1Q7Z5L0 202 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 RNF182Q8N6D2 247 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 FOXC2Q99958 501 aa10.28□□□□□ -0.76
PTPN21-202ENST00000536337 H3BUT2 72 aa10.27□□□□□ -0.76
PTPN21-202ENST00000536337 SH2D1AO60880 128 aa10.27□□□□□ -0.76
PTPN21-202ENST00000536337 NDUFB8O95169 186 aa10.27□□□□□ -0.76
PTPN21-202ENST00000536337 LEPP41159 167 aa10.27□□□□□ -0.76
PTPN21-202ENST00000536337 FAM231DQ6ZW35 169 aa10.27□□□□□ -0.76
PTPN21-202ENST00000536337 GTF2H5Q6ZYL4 71 aa10.27□□□□□ -0.76
PTPN21-202ENST00000536337 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 COL4A2P08572 1712 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 FAM71F2Q6NXP2 309 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 ZNF502Q8TBZ5 544 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 GTSF1Q8WW33 167 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 SHANK2-AS3Q9BTD1 123 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 ZFYVE26Q68DK2 2539 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 SHISA9B4DS77 424 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 TRGV3P03979 118 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 GDF5OSQ5U4N7 250 aa10.27□□□□□ -0.77
PTPN21-202ENST00000536337 IGKV1D-37A0A075B6S9 117 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 IGKV1-17P01599 117 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 HIST1H1AQ02539 215 aaPredicted RBP10.26□□□□□ -0.77
PTPN21-202ENST00000536337 PET117Q6UWS5 81 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 THAP8Q8NA92 274 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 MUC3AQ02505 3323 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 IFI27L1Q96BM0 104 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 PHLDA3Q9Y5J5 127 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 ABCA2Q9BZC7 2435 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 G3V318 75 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 IGLV2-23P01705 113 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 BRD3OSQ6XYD6 125 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 ST20Q9HBF5 79 aa10.26□□□□□ -0.77
PTPN21-202ENST00000536337 ATP5G2Q06055 141 aa10.25□□□□□ -0.77
PTPN21-202ENST00000536337 SFTA2Q6UW10 78 aa10.25□□□□□ -0.77
PTPN21-202ENST00000536337 LINC00311Q8N616 119 aa10.25□□□□□ -0.77
PTPN21-202ENST00000536337 POLQO75417 2590 aa10.25□□□□□ -0.77
PTPN21-202ENST00000536337 CEACAM4O75871 244 aa10.25□□□□□ -0.77
PTPN21-202ENST00000536337 HBDP02042 147 aa10.25□□□□□ -0.77
PTPN21-202ENST00000536337 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
PTPN21-202ENST00000536337 RUSC1-AS1Q66K80 236 aa10.25□□□□□ -0.77
PTPN21-202ENST00000536337 ZNF491Q8N8L2 437 aa10.25□□□□□ -0.77
PTPN21-202ENST00000536337 ADAMTS20P59510 1910 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 FAM74A4Q5TZK3 123 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 PRSS57Q6UWY2 283 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 K7ERU9 68 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 NDUFA3O95167 84 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 RPS20P60866 119 aaKnown RBP10.24□□□□□ -0.77
PTPN21-202ENST00000536337 KLRB1Q12918 225 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 FAM120AOSQ5T036 256 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 COL25A1Q9BXS0 654 aaPredicted RBP10.24□□□□□ -0.77
PTPN21-202ENST00000536337 SPRY2O43597 315 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 OR10J6PQ8NGY7 276 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 CFAP47Q6ZTR5 3102 aa10.24□□□□□ -0.77
PTPN21-202ENST00000536337 GP9P14770 177 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 LINC00310P59036 64 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 Q6AWC8 147 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 VGLL1Q99990 258 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 PEF1Q9UBV8 284 aaKnown RBP10.23□□□□□ -0.77
PTPN21-202ENST00000536337 NAV2Q8IVL1 2488 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 C3orf36Q3SXR2 165 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 EEF1AKMT3Q96AZ1 226 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 COX11Q9Y6N1 276 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 LTAP01374 205 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 UBE2V1Q13404 147 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 ADGRG4Q8IZF6 3080 aa10.23□□□□□ -0.77
PTPN21-202ENST00000536337 Q5PR19 223 aa10.22□□□□□ -0.77
PTPN21-202ENST00000536337 HIST1H4GQ99525 98 aa10.22□□□□□ -0.77
PTPN21-202ENST00000536337 H3BVH4 76 aa10.22□□□□□ -0.77
PTPN21-202ENST00000536337 GTSCR1Q86UQ5 136 aa10.22□□□□□ -0.77
PTPN21-202ENST00000536337 NEU4Q8WWR8 484 aaPredicted RBP10.22□□□□□ -0.77
PTPN21-202ENST00000536337 ZNF562Q6V9R5 426 aa10.22□□□□□ -0.77
PTPN21-202ENST00000536337 KAAG1Q9UBP8 84 aa10.22□□□□□ -0.77
PTPN21-202ENST00000536337 PRTN3P24158 256 aa10.21□□□□□ -0.77
PTPN21-202ENST00000536337 MRPS16Q9Y3D3 137 aaKnown RBP10.21□□□□□ -0.77
PTPN21-202ENST00000536337 FABP2P12104 132 aa10.21□□□□□ -0.78
PTPN21-202ENST00000536337 BCL6BQ8N143 479 aaPredicted RBP10.21□□□□□ -0.78
PTPN21-202ENST00000536337 MSRB1Q9NZV6 116 aa10.21□□□□□ -0.78
PTPN21-202ENST00000536337 K7EIM0 57 aa10.21□□□□□ -0.78
PTPN21-202ENST00000536337 ZNF492Q9P255 531 aa10.21□□□□□ -0.78
PTPN21-202ENST00000536337 SCGB1C2P0DMR2 95 aa10.2□□□□□ -0.78
PTPN21-202ENST00000536337 RNASE4P34096 147 aaKnown RBP10.2□□□□□ -0.78
PTPN21-202ENST00000536337 BPESC1Q9GZL8 116 aa10.2□□□□□ -0.78
PTPN21-202ENST00000536337 CENPEQ02224 2701 aa10.2□□□□□ -0.78
PTPN21-202ENST00000536337 SAA4P35542 130 aa10.2□□□□□ -0.78
PTPN21-202ENST00000536337 PLP1P60201 277 aa10.2□□□□□ -0.78
PTPN21-202ENST00000536337 NHP2Q9NX24 153 aaKnown RBP10.2□□□□□ -0.78
PTPN21-202ENST00000536337 A0A1B0GW15 77 aa10.2□□□□□ -0.78
PTPN21-202ENST00000536337 I3L2K1 104 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms