RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 KNCNA6PVL3 124 aa11.53□□□□□ -0.56
CNN1-202ENST00000535659 K7EIL1 84 aa11.53□□□□□ -0.56
CNN1-202ENST00000535659 DEFB1P60022 68 aa11.53□□□□□ -0.56
CNN1-202ENST00000535659 UBE2G2P60604 165 aa11.53□□□□□ -0.56
CNN1-202ENST00000535659 EBLN2Q6P2I7 272 aa11.53□□□□□ -0.56
CNN1-202ENST00000535659 FOXI2Q6ZQN5 318 aa11.53□□□□□ -0.56
CNN1-202ENST00000535659 RXFP4Q8TDU9 374 aa11.53□□□□□ -0.56
CNN1-202ENST00000535659 NKX6-2Q9C056 277 aaPredicted RBP11.53□□□□□ -0.56
CNN1-202ENST00000535659 SAV1Q9H4B6 383 aaPredicted RBP11.53□□□□□ -0.56
CNN1-202ENST00000535659 TUBA4BQ9H853 241 aa11.53□□□□□ -0.56
CNN1-202ENST00000535659 YTHDF2Q9Y5A9 579 aaKnown RBP11.53□□□□□ -0.56
CNN1-202ENST00000535659 FAM74A7A6NL05 159 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 PRAC2D3DTV9 90 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 F6UB75 175 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 PAGE4O60829 102 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 IGHV4-30-4P0DP06 118 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 CSN1S1P47710 185 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 PMS2P11Q13670 270 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 GDF5OSQ5U4N7 250 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 ARL6IP6Q8N6S5 226 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 SRD5A3Q9H8P0 318 aa11.52□□□□□ -0.57
CNN1-202ENST00000535659 A0A0J9YX75 114 aa11.51□□□□□ -0.57
CNN1-202ENST00000535659 A8MZ25 164 aa11.51□□□□□ -0.57
CNN1-202ENST00000535659 PRB4P10163 310 aaPredicted RBP11.51□□□□□ -0.57
CNN1-202ENST00000535659 DEFB121Q5J5C9 76 aa11.51□□□□□ -0.57
CNN1-202ENST00000535659 ZNF767PQ75MW2 155 aa11.51□□□□□ -0.57
CNN1-202ENST00000535659 STHQ8IWL8 128 aa11.51□□□□□ -0.57
CNN1-202ENST00000535659 OR8A1Q8NGG7 326 aa11.51□□□□□ -0.57
CNN1-202ENST00000535659 CMTM2Q8TAZ6 248 aa11.51□□□□□ -0.57
CNN1-202ENST00000535659 GNG13Q9P2W3 67 aa11.51□□□□□ -0.57
CNN1-202ENST00000535659 ARL2-SNX15V9GYD0 113 aa11.51□□□□□ -0.57
CNN1-202ENST00000535659 TGP01266 2768 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 GGTLC3B5MD39 225 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 H3BMM0 161 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 SLC25A5P05141 298 aaKnown RBP11.5□□□□□ -0.57
CNN1-202ENST00000535659 ZNF705DP0CH99 300 aaPredicted RBP11.5□□□□□ -0.57
CNN1-202ENST00000535659 ZNF705BP0CI00 300 aaPredicted RBP11.5□□□□□ -0.57
CNN1-202ENST00000535659 HLA-DRB4P13762 266 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 DEFA6Q01524 100 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 CST9LP1Q5W188 147 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 PCNPQ8WW12 178 aaKnown RBP11.5□□□□□ -0.57
CNN1-202ENST00000535659 MANBALQ9NQG1 85 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 HLA-DRB4X5D2U9 266 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 DUSP14O95147 198 aaKnown RBP11.5□□□□□ -0.57
CNN1-202ENST00000535659 NMBP08949 121 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 RAB14P61106 215 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 OR10J6PQ8NGY7 276 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 EPDR1Q9UM22 224 aa11.5□□□□□ -0.57
CNN1-202ENST00000535659 RBMY1BA6NDE4 496 aaKnown RBP11.49□□□□□ -0.57
CNN1-202ENST00000535659 RBMY1EA6NEQ0 496 aaKnown RBP11.49□□□□□ -0.57
CNN1-202ENST00000535659 DIRC3C9JPN6 131 aa11.49□□□□□ -0.57
CNN1-202ENST00000535659 IFNA1P01562 189 aa11.49□□□□□ -0.57
CNN1-202ENST00000535659 RBMY1DP0C7P1 496 aaKnown RBP11.49□□□□□ -0.57
CNN1-202ENST00000535659 CCDC28AQ8IWP9 274 aa11.49□□□□□ -0.57
CNN1-202ENST00000535659 OR4B1Q8NGF8 309 aa11.49□□□□□ -0.57
CNN1-202ENST00000535659 LOC102724200A0A096LPH7 203 aaPredicted RBP11.48□□□□□ -0.57
CNN1-202ENST00000535659 RPL35AP18077 110 aaKnown RBP11.48□□□□□ -0.57
CNN1-202ENST00000535659 CNN1P51911 297 aaKnown RBP11.48□□□□□ -0.57
CNN1-202ENST00000535659 HIST1H1AQ02539 215 aaPredicted RBP11.48□□□□□ -0.57
CNN1-202ENST00000535659 LINC00322Q6ZN03 302 aaPredicted RBP11.48□□□□□ -0.57
CNN1-202ENST00000535659 TRPT1Q86TN4 253 aaKnown RBP11.48□□□□□ -0.57
CNN1-202ENST00000535659 CLUHP3Q96NS8 147 aa11.48□□□□□ -0.57
CNN1-202ENST00000535659 RBAKDNA6NC62 111 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 TCRAP04437 139 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 TAGLN2P37802 199 aaKnown RBP11.47□□□□□ -0.57
CNN1-202ENST00000535659 ATP5G3P48201 142 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 GNG5P63218 68 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 HAGHQ16775 308 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 MRAPQ8TCY5 172 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 LINC00477Q96M19 166 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 TXNDC17Q9BRA2 123 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
CNN1-202ENST00000535659 IGKV2-40A0A087WW87 121 aaPredicted RBP11.46□□□□□ -0.57
CNN1-202ENST00000535659 C11orf94C9JXX5 98 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 NPIPB6E9PJ23 425 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 IGKV2D-40P01614 121 aaPredicted RBP11.46□□□□□ -0.57
CNN1-202ENST00000535659 FRMD6-AS1P0C7T7 363 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 ERCC8Q13216 396 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 C9orf47Q6ZRZ4 202 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 HIST1H2BAQ96A08 127 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 VGLL1Q99990 258 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 TCEAL7Q9BRU2 100 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 AGPAT4-IT1Q9H0P7 198 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 VAX2Q9UIW0 290 aa11.46□□□□□ -0.57
CNN1-202ENST00000535659 SERTM2A0A1B0GWG4 89 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 RBFOX3A6NFN3 312 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 A8MTW9 85 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 F6UZH7 168 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 BCL2P10415 239 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 GOLT1AQ6ZVE7 132 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 RARRES2Q99969 163 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 CSTL1Q9H114 145 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 K7EQM0 130 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
CNN1-202ENST00000535659 CLLU1Q5K131 121 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 TMEM78Q5T7P6 136 aa11.45□□□□□ -0.58
CNN1-202ENST00000535659 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms