RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 KIAA1549Q9HCM3 1950 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 GREB1Q4ZG55 1949 aa4.03□□□□□ -1.76
SNHG1-201ENST00000535076 PLXNB3Q9ULL4 1909 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 SMIM22K7EJ46 135 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 OVOL3O00110 214 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 NDUFB3O43676 98 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 NDUFS5O43920 106 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 TCRAP04437 139 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 SUB1P53999 127 aaKnown RBP eCLIP4.02□□□□□ -1.77
SNHG1-201ENST00000535076 CTXN1P60606 82 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 HBBP68871 147 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 LINC01590Q5TEZ4 76 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 PVRIGQ6DKI7 326 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 LINC00173Q6ZV60 143 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 CNRIP1Q96F85 164 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-201ENST00000535076 ZNF414Q96IQ9 312 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 WFDC6Q9BQY6 131 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 SLC25A15Q9Y619 301 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 PLXNB2O15031 1838 aa4.02□□□□□ -1.77
SNHG1-201ENST00000535076 COL4A4P53420 1690 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-201ENST00000535076 A0A0D9SEW6 157 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 CPSF4LA6NMK7 179 aaKnown RBP4.01□□□□□ -1.77
SNHG1-201ENST00000535076 K7EMT4 169 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 NDUFC1O43677 76 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 IGKV1D-33P01593 117 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 IGKV1-33P01594 117 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 FRMD6-AS1P0C7T7 363 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 CCL1P22362 96 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 PCBD1P61457 104 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 DAD1P61803 113 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 ATXN8Q156A1 80 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 FHL5Q5TD97 284 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 SCGB1D4Q6XE38 83 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 ZFP2Q6ZN57 461 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 Q6ZVL8 140 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 FP248Q71RG6 208 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-201ENST00000535076 LY6G5BQ8NDX9 201 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 C11orf45Q8TAV5 145 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 C10orf105Q8TEF2 133 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 KLK6Q92876 244 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 HIST1H4GQ99525 98 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 TAS2R4Q9NYW5 299 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 RBM12B-AS1Q9P1G2 102 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 ZNF492Q9P255 531 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 PTPRDP23468 1912 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 PLXNA2O75051 1894 aa4.01□□□□□ -1.77
SNHG1-201ENST00000535076 NUP98P52948 1817 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 SCN10AQ9Y5Y9 1956 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 DOCK11Q5JSL3 2073 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 LINC01546A6NGU7 62 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 M0QZQ0 153 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 SRSF10O75494 262 aaKnown RBP4□□□□□ -1.77
SNHG1-201ENST00000535076 LYPD3O95274 346 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 LGALS3P17931 250 aaKnown RBP4□□□□□ -1.77
SNHG1-201ENST00000535076 LMO2P25791 158 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 MYCNOSP40205 109 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 MFAP2P55001 183 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 HERVK_113P61574 105 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 TMEM52BQ4KMG9 183 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 WDR38Q5JTN6 314 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 DEFB106AQ8N104 65 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 PRR26Q8N8Z3 221 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 WFDC11Q8NEX6 87 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 SPATA3Q8NHX4 192 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 NTN5Q8WTR8 489 aaPredicted RBP4□□□□□ -1.77
SNHG1-201ENST00000535076 METTL26Q96S19 204 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 MYO16Q9Y6X6 1858 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 ZNF831Q5JPB2 1677 aa4□□□□□ -1.77
SNHG1-201ENST00000535076 SCN3AQ9NY46 2000 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 A0A0B4J2C4 111 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 LOC107984156A0A0G2JMH3 177 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 PRR32B1ATL7 298 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 SMKR1H3BMG3 65 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 CCL21O00585 134 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 PEX7O00628 323 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 ZNF823P16415 610 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 SAA4P35542 130 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 NCBP2P52298 156 aaKnown RBP eCLIP3.99□□□□□ -1.77
SNHG1-201ENST00000535076 SYNJ2BPP57105 145 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 FHL1Q13642 323 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 TWIST1Q15672 202 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 TMEM155Q4W5P6 130 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 CEMP1Q6PRD7 247 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-201ENST00000535076 ZNF497Q6ZNH5 498 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 ARL17AQ8IVW1 177 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 VSIG2Q96IQ7 327 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 Q9H8V8 135 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 SLC25A22Q9H936 323 aa3.99□□□□□ -1.77
SNHG1-201ENST00000535076 LSM4Q9Y4Z0 139 aaKnown RBP3.99□□□□□ -1.77
SNHG1-201ENST00000535076 TRIP12Q14669 1992 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-201ENST00000535076 PTPRSQ13332 1948 aa3.98□□□□□ -1.77
SNHG1-201ENST00000535076 RAI1Q7Z5J4 1906 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-201ENST00000535076 TRBV27A0A0K0K1C4 114 aa3.98□□□□□ -1.77
SNHG1-201ENST00000535076 A0A1B0GWA3 101 aa3.98□□□□□ -1.77
SNHG1-201ENST00000535076 LINC01549A6NIU2 74 aa3.98□□□□□ -1.77
SNHG1-201ENST00000535076 INS-IGF2F8WCM5 200 aa3.98□□□□□ -1.77
SNHG1-201ENST00000535076 FAM72CH0Y354 149 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms