RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ZNF331Q9NQX6 463 aaPredicted RBP11.47□□□□□ -0.57
PHF3-209ENST00000509330 PRAC2D3DTV9 90 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 GATA3P23771 443 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 CSN1S1P47710 185 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 HIST2H2BDQ6DRA6 164 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 TMEM136Q6ZRR5 245 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 WFDC11Q8NEX6 87 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 GTSF1Q8WW33 167 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 MBD6Q96DN6 1003 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 MTORP42345 2549 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 MUC21A0A0G2JKD1 596 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 MUC21A0A140T8X8 626 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 K7EQM0 130 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 IGF1P05019 195 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 SMIM6P0DI80 62 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 MUC21Q5SSG8 566 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 GDF5OSQ5U4N7 250 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 FAM231DQ6ZW35 169 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 METTL26Q96S19 204 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 RNF24Q9Y225 148 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 KMT2BQ9UMN6 2715 aaPredicted RBP11.46□□□□□ -0.57
PHF3-209ENST00000509330 CRISP2P16562 243 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 CD33P20138 364 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 EDN2P20800 178 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 SLAQ13239 276 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 TSKUQ8WUA8 353 aa11.46□□□□□ -0.57
PHF3-209ENST00000509330 OR4X2Q8NGF9 303 aa11.46□□□□□ -0.58
PHF3-209ENST00000509330 NF1P21359 2839 aa11.45□□□□□ -0.58
PHF3-209ENST00000509330 GCN1Q92616 2671 aaKnown RBP11.45□□□□□ -0.58
PHF3-209ENST00000509330 ZNF705DP0CH99 300 aaPredicted RBP11.45□□□□□ -0.58
PHF3-209ENST00000509330 ZNF705BP0CI00 300 aaPredicted RBP11.45□□□□□ -0.58
PHF3-209ENST00000509330 RPL11P62913 178 aaKnown RBP11.45□□□□□ -0.58
PHF3-209ENST00000509330 RELQ04864 619 aaPredicted RBP11.45□□□□□ -0.58
PHF3-209ENST00000509330 LOXL1Q08397 574 aaPredicted RBP11.45□□□□□ -0.58
PHF3-209ENST00000509330 C19orf71A6NCJ1 209 aa11.45□□□□□ -0.58
PHF3-209ENST00000509330 IGHG4P01861 327 aa11.45□□□□□ -0.58
PHF3-209ENST00000509330 SRIP30626 198 aa11.45□□□□□ -0.58
PHF3-209ENST00000509330 CRIP1P50238 77 aa11.45□□□□□ -0.58
PHF3-209ENST00000509330 BAGE3Q86Y29 109 aa11.45□□□□□ -0.58
PHF3-209ENST00000509330 TMEM75Q8N9X5 138 aa11.45□□□□□ -0.58
PHF3-209ENST00000509330 TP53TG3Q9ULZ0 132 aa11.45□□□□□ -0.58
PHF3-209ENST00000509330 FAM223BA6NKX1 122 aa11.44□□□□□ -0.58
PHF3-209ENST00000509330 HOXA3O43365 443 aaPredicted RBP11.44□□□□□ -0.58
PHF3-209ENST00000509330 DEFB1P60022 68 aa11.44□□□□□ -0.58
PHF3-209ENST00000509330 FAM223AQ8IWN6 122 aa11.44□□□□□ -0.58
PHF3-209ENST00000509330 FASNP49327 2511 aaKnown RBP11.44□□□□□ -0.58
PHF3-209ENST00000509330 PSG9Q00887 426 aa11.44□□□□□ -0.58
PHF3-209ENST00000509330 PDE6HQ13956 83 aa11.44□□□□□ -0.58
PHF3-209ENST00000509330 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.44□□□□□ -0.58
PHF3-209ENST00000509330 LYPD1Q8N2G4 141 aa11.44□□□□□ -0.58
PHF3-209ENST00000509330 GNB1LQ9BYB4 327 aa11.44□□□□□ -0.58
PHF3-209ENST00000509330 M0QZK8 103 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 SERF1AO75920 110 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 SRD5A1P18405 259 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 RAB9AP51151 201 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 IQCJQ1A5X6 159 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 TRAV9-1A0A075B6T8 112 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 UNC79Q9P2D8 2635 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 APCSP02743 223 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 PRSS22Q9GZN4 317 aa11.43□□□□□ -0.58
PHF3-209ENST00000509330 A8MWL6 223 aa11.42□□□□□ -0.58
PHF3-209ENST00000509330 J3KRW8 73 aa11.42□□□□□ -0.58
PHF3-209ENST00000509330 PLA2G2AP14555 144 aa11.42□□□□□ -0.58
PHF3-209ENST00000509330 KRTAP1-3Q8IUG1 177 aa11.42□□□□□ -0.58
PHF3-209ENST00000509330 CT45A10P0DMU9 189 aa11.42□□□□□ -0.58
PHF3-209ENST00000509330 LINC00310P59036 64 aa11.42□□□□□ -0.58
PHF3-209ENST00000509330 TM4SF20Q53R12 229 aa11.42□□□□□ -0.58
PHF3-209ENST00000509330 RCHY1Q96PM5 261 aa11.42□□□□□ -0.58
PHF3-209ENST00000509330 FOXA3P55318 350 aaPredicted RBP11.41□□□□□ -0.58
PHF3-209ENST00000509330 WDR73Q6P4I2 378 aa11.41□□□□□ -0.58
PHF3-209ENST00000509330 ZNF80P51504 273 aaPredicted RBP11.41□□□□□ -0.58
PHF3-209ENST00000509330 CRIP2P52943 208 aaPredicted RBP11.41□□□□□ -0.58
PHF3-209ENST00000509330 C8orf86Q6ZUL3 223 aa11.41□□□□□ -0.58
PHF3-209ENST00000509330 ZNF253O75346 499 aa11.4□□□□□ -0.58
PHF3-209ENST00000509330 ZNF492Q9P255 531 aa11.4□□□□□ -0.58
PHF3-209ENST00000509330 ZFP30Q9Y2G7 519 aa11.4□□□□□ -0.58
PHF3-209ENST00000509330 J3QKU1 62 aa11.4□□□□□ -0.58
PHF3-209ENST00000509330 J3QLI3 93 aa11.4□□□□□ -0.58
PHF3-209ENST00000509330 RPLP1P05386 114 aaKnown RBP11.4□□□□□ -0.58
PHF3-209ENST00000509330 COA6Q5JTJ3 125 aaKnown RBP11.4□□□□□ -0.58
PHF3-209ENST00000509330 SMIM12Q96EX1 92 aa11.4□□□□□ -0.58
PHF3-209ENST00000509330 HLA-DQA1P01909 254 aa11.4□□□□□ -0.59
PHF3-209ENST00000509330 KLK9Q2XQG4 91 aa11.4□□□□□ -0.59
PHF3-209ENST00000509330 C16orf92Q96LL3 132 aa11.4□□□□□ -0.59
PHF3-209ENST00000509330 PRR25Q96S07 402 aa11.4□□□□□ -0.59
PHF3-209ENST00000509330 KLK9Q9UKQ9 250 aa11.4□□□□□ -0.59
PHF3-209ENST00000509330 SH2D1AO60880 128 aa11.39□□□□□ -0.59
PHF3-209ENST00000509330 ARMS2P0C7Q2 107 aa11.39□□□□□ -0.59
PHF3-209ENST00000509330 TMEM18Q96B42 140 aa11.39□□□□□ -0.59
PHF3-209ENST00000509330 TRAV8-2A0A0B4J237 113 aa11.39□□□□□ -0.59
PHF3-209ENST00000509330 M0QZ24 198 aa11.39□□□□□ -0.59
PHF3-209ENST00000509330 PMCHP20382 165 aa11.39□□□□□ -0.59
PHF3-209ENST00000509330 VPREB3Q9UKI3 123 aa11.39□□□□□ -0.59
PHF3-209ENST00000509330 IGLV1-40P01703 118 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 MT-ND6P03923 174 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 HBBP68871 147 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 Q6ZQT7 251 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 RBPMS2Q6ZRY4 209 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms