RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SMIM27A0A1W2PRY6 76 aa9.39□□□□□ -0.91
LIN54-206ENST00000506560 DIRC3C9JPN6 131 aa9.39□□□□□ -0.91
LIN54-206ENST00000506560 NUPR1O60356 82 aa9.39□□□□□ -0.91
LIN54-206ENST00000506560 RPL19P84098 196 aaKnown RBP9.39□□□□□ -0.91
LIN54-206ENST00000506560 ZC2HC1AQ96GY0 325 aa9.39□□□□□ -0.91
LIN54-206ENST00000506560 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
LIN54-206ENST00000506560 TRBV7-1A0A0A6YYK4 115 aa9.38□□□□□ -0.91
LIN54-206ENST00000506560 SNURFLB1AK76 121 aa9.38□□□□□ -0.91
LIN54-206ENST00000506560 EDN2P20800 178 aa9.38□□□□□ -0.91
LIN54-206ENST00000506560 Q8TAT8 98 aa9.38□□□□□ -0.91
LIN54-206ENST00000506560 NEU1Q99519 415 aa9.38□□□□□ -0.91
LIN54-206ENST00000506560 BEX4Q9NWD9 120 aaPredicted RBP9.38□□□□□ -0.91
LIN54-206ENST00000506560 F2Z2F3 143 aa9.38□□□□□ -0.91
LIN54-206ENST00000506560 RPL7P18124 248 aaKnown RBP9.38□□□□□ -0.91
LIN54-206ENST00000506560 TMEM256Q8N2U0 113 aa9.38□□□□□ -0.91
LIN54-206ENST00000506560 NUP35Q8NFH5 326 aa9.38□□□□□ -0.91
LIN54-206ENST00000506560 MRPL18Q9H0U6 180 aaKnown RBP9.38□□□□□ -0.91
LIN54-206ENST00000506560 C19orf71A6NCJ1 209 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 PRAC2D3DTV9 90 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 SMAD7O15105 426 aaKnown RBP9.37□□□□□ -0.91
LIN54-206ENST00000506560 ARL3P36405 182 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 CRIP1P50238 77 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 FAM231DQ6ZW35 169 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 PSG8Q9UQ74 426 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 FSHBP01225 129 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 TMEM18Q96B42 140 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 PSMG3-AS1Q96PY0 264 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 VGLL1Q99990 258 aa9.37□□□□□ -0.91
LIN54-206ENST00000506560 RAB4BP61018 213 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 PSG3Q16557 428 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 HIST2H2BDQ6DRA6 164 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 TP53TG3Q9ULZ0 132 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 SORL1Q92673 2214 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 CFHR3Q02985 330 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 TMEM136Q6ZRR5 245 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 GBGT1Q8N5D6 347 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 PRSS22Q9GZN4 317 aa9.36□□□□□ -0.91
LIN54-206ENST00000506560 J3QKU1 62 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 CHEK1O14757 476 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 HOXA3O43365 443 aaPredicted RBP9.35□□□□□ -0.91
LIN54-206ENST00000506560 SCGB2A1O75556 95 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 PDE6HQ13956 83 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 GRAMD2BQ96HH9 432 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 NDUFAF3Q9BU61 184 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 SSBP4Q9BWG4 385 aaPredicted RBP9.35□□□□□ -0.91
LIN54-206ENST00000506560 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 ZNF331Q9NQX6 463 aaPredicted RBP9.35□□□□□ -0.91
LIN54-206ENST00000506560 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 J3QLI3 93 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 CD33P20138 364 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 RAB9AP51151 201 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 ERCC8Q13216 396 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 LYPD1Q8N2G4 141 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 OR4X2Q8NGF9 303 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 RPP21Q9H633 154 aaKnown RBP9.35□□□□□ -0.91
LIN54-206ENST00000506560 IZUMO1RA6ND01 250 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 M0QZK8 103 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 P01737 135 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 LINC00310P59036 64 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 LRRC75A-AS1Q8N1F1 130 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 TMEM75Q8N9X5 138 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 TSKUQ8WUA8 353 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 RNF24Q9Y225 148 aa9.35□□□□□ -0.91
LIN54-206ENST00000506560 EREGO14944 169 aa9.34□□□□□ -0.91
LIN54-206ENST00000506560 CAMPP49913 170 aa9.34□□□□□ -0.91
LIN54-206ENST00000506560 DEFB1P60022 68 aa9.34□□□□□ -0.91
LIN54-206ENST00000506560 SLAQ13239 276 aa9.34□□□□□ -0.91
LIN54-206ENST00000506560 METTL26Q96S19 204 aa9.34□□□□□ -0.91
LIN54-206ENST00000506560 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
LIN54-206ENST00000506560 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
LIN54-206ENST00000506560 SSTP61278 116 aa9.34□□□□□ -0.91
LIN54-206ENST00000506560 PGLYRP4Q96LB8 373 aa9.34□□□□□ -0.91
LIN54-206ENST00000506560 TRAV9-1A0A075B6T8 112 aa9.33□□□□□ -0.92
LIN54-206ENST00000506560 SCGB1D1O95968 90 aa9.33□□□□□ -0.92
LIN54-206ENST00000506560 RELQ04864 619 aaPredicted RBP9.33□□□□□ -0.92
LIN54-206ENST00000506560 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
LIN54-206ENST00000506560 Q6YL49 198 aa9.33□□□□□ -0.92
LIN54-206ENST00000506560 OR2D3Q8NGH3 330 aa9.33□□□□□ -0.92
LIN54-206ENST00000506560 U3KQE9 123 aa9.33□□□□□ -0.92
LIN54-206ENST00000506560 IGKV3-7A0A075B6H7 116 aa9.33□□□□□ -0.92
LIN54-206ENST00000506560 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.33□□□□□ -0.92
LIN54-206ENST00000506560 ZNF705DP0CH99 300 aaPredicted RBP9.33□□□□□ -0.92
LIN54-206ENST00000506560 ZNF705BP0CI00 300 aaPredicted RBP9.33□□□□□ -0.92
LIN54-206ENST00000506560 ZNF80P51504 273 aaPredicted RBP9.33□□□□□ -0.92
LIN54-206ENST00000506560 ZNF492Q9P255 531 aa9.33□□□□□ -0.92
LIN54-206ENST00000506560 ANK3Q12955 4377 aaKnown RBP9.32□□□□□ -0.92
LIN54-206ENST00000506560 TMSB15BA0A087X1C1 80 aa9.32□□□□□ -0.92
LIN54-206ENST00000506560 PSG9Q00887 426 aa9.32□□□□□ -0.92
LIN54-206ENST00000506560 IQCJQ1A5X6 159 aa9.32□□□□□ -0.92
LIN54-206ENST00000506560 TM4SF20Q53R12 229 aa9.32□□□□□ -0.92
LIN54-206ENST00000506560 S100A7AQ86SG5 101 aa9.32□□□□□ -0.92
LIN54-206ENST00000506560 DAZAP1Q96EP5 407 aaKnown RBP9.32□□□□□ -0.92
LIN54-206ENST00000506560 VPREB3Q9UKI3 123 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms