RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 RAB9AP51151 201 aa12.89□□□□□ -0.35
VCAN-204ENST00000502527 PRR25Q96S07 402 aa12.89□□□□□ -0.35
VCAN-204ENST00000502527 CRXO43186 299 aaPredicted RBP12.88□□□□□ -0.35
VCAN-204ENST00000502527 Q6ZN92 141 aa12.88□□□□□ -0.35
VCAN-204ENST00000502527 CLEC3BP05452 202 aa12.87□□□□□ -0.35
VCAN-204ENST00000502527 ZNF493Q6ZR52 646 aa12.87□□□□□ -0.35
VCAN-204ENST00000502527 IGHV3-35A0A0C4DH35 117 aa12.87□□□□□ -0.35
VCAN-204ENST00000502527 CENPVL3A0A0U1RRI6 287 aa12.87□□□□□ -0.35
VCAN-204ENST00000502527 GOSR1O95249 250 aa12.87□□□□□ -0.35
VCAN-204ENST00000502527 HNRNPA3P51991 378 aaKnown RBP12.87□□□□□ -0.35
VCAN-204ENST00000502527 MAJINQ3KP22 176 aa12.87□□□□□ -0.35
VCAN-204ENST00000502527 LYZL1Q6UWQ5 148 aa12.87□□□□□ -0.35
VCAN-204ENST00000502527 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
VCAN-204ENST00000502527 BMI1P35226 326 aa12.86□□□□□ -0.35
VCAN-204ENST00000502527 UQCRFS1P47985 274 aa12.86□□□□□ -0.35
VCAN-204ENST00000502527 RPS20P60866 119 aaKnown RBP12.86□□□□□ -0.35
VCAN-204ENST00000502527 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
VCAN-204ENST00000502527 SPTBN1Q01082 2364 aaKnown RBP12.86□□□□□ -0.35
VCAN-204ENST00000502527 IGHV3OR16-8A0A075B7F1 116 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 TMSB15BA0A087X1C1 80 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 C19orf84I3L1E1 186 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 IGHG4P01861 327 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 ZNF138P52744 262 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 BATFQ16520 125 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 ZFAND3Q9H8U3 227 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 A0A087X0K7 114 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 CSN3P07498 182 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 GNLYP22749 145 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 SPATA12Q7Z6I5 190 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 EEF1AKMT3Q96AZ1 226 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 VGLL1Q99990 258 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 HSPB8Q9UJY1 196 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 HIVEP3Q5T1R4 2406 aa12.85□□□□□ -0.35
VCAN-204ENST00000502527 BUB3O43684 328 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 IGFL4Q6B9Z1 124 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 MAP1LC3CQ9BXW4 147 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 TRBV7-1A0A0A6YYK4 115 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 OR4C46A6NHA9 309 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 G3V318 75 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 COL5A1-AS1Q5SY13 56 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 LINC00173Q6ZV60 143 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 C5orf56Q8N8D9 126 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 Q8TAT8 98 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
VCAN-204ENST00000502527 WNK2Q9Y3S1 2297 aa12.83□□□□□ -0.35
VCAN-204ENST00000502527 IGHV4-39P01824 125 aa12.83□□□□□ -0.36
VCAN-204ENST00000502527 IGLL1P15814 213 aa12.83□□□□□ -0.36
VCAN-204ENST00000502527 HLA-DMBP28068 263 aa12.83□□□□□ -0.36
VCAN-204ENST00000502527 PRSS3P2Q8NHM4 247 aa12.83□□□□□ -0.36
VCAN-204ENST00000502527 CCDC140Q96MF4 163 aa12.83□□□□□ -0.36
VCAN-204ENST00000502527 LINC01548A6NM66 108 aa12.82□□□□□ -0.36
VCAN-204ENST00000502527 SRSF2Q01130 221 aaKnown RBP12.82□□□□□ -0.36
VCAN-204ENST00000502527 PET117Q6UWS5 81 aa12.82□□□□□ -0.36
VCAN-204ENST00000502527 FA2HQ7L5A8 372 aa12.82□□□□□ -0.36
VCAN-204ENST00000502527 SLC50A1Q9BRV3 221 aa12.82□□□□□ -0.36
VCAN-204ENST00000502527 TMEM191AQ9H0A3 160 aa12.82□□□□□ -0.36
VCAN-204ENST00000502527 LAMTOR2Q9Y2Q5 125 aa12.82□□□□□ -0.36
VCAN-204ENST00000502527 MRPS16Q9Y3D3 137 aaKnown RBP12.82□□□□□ -0.36
VCAN-204ENST00000502527 TSPOP30536 169 aa12.82□□□□□ -0.36
VCAN-204ENST00000502527 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
VCAN-204ENST00000502527 TMEM213A2RRL7 107 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 CLPSL1A2RUU4 121 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 ZNF25P17030 456 aaPredicted RBP12.81□□□□□ -0.36
VCAN-204ENST00000502527 ZNF80P51504 273 aaPredicted RBP12.81□□□□□ -0.36
VCAN-204ENST00000502527 PAX8Q06710 450 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 FER1L6-AS1Q8NA97 138 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 MOB4Q9Y3A3 225 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 U3KQK5 164 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 RBAKDNA6NC62 111 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 G0S2P27469 103 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 ST20Q9HBF5 79 aa12.81□□□□□ -0.36
VCAN-204ENST00000502527 FABP5P3A8MUU1 101 aa12.8□□□□□ -0.36
VCAN-204ENST00000502527 D6R8Y8 96 aa12.8□□□□□ -0.36
VCAN-204ENST00000502527 ATP5G2Q06055 141 aa12.8□□□□□ -0.36
VCAN-204ENST00000502527 ORMDL3Q8N138 153 aa12.8□□□□□ -0.36
VCAN-204ENST00000502527 METTL26Q96S19 204 aa12.8□□□□□ -0.36
VCAN-204ENST00000502527 CHD8Q9HCK8 2581 aa12.8□□□□□ -0.36
VCAN-204ENST00000502527 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
VCAN-204ENST00000502527 IGLC6P0CF74 106 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 AMN1Q8IY45 258 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 OR10AG1Q8NH19 301 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 PRELID3AQ96N28 172 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 IGHV1-69DA0A0B4J2H0 117 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 IGHV1-69P01742 117 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 ORM1P02763 201 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 TWIST1Q15672 202 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 TMEM219Q86XT9 240 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 NCOR2Q9Y618 2525 aa12.79□□□□□ -0.36
VCAN-204ENST00000502527 TRAV41A0A0B4J266 112 aa12.78□□□□□ -0.36
VCAN-204ENST00000502527 IGHV3-66A0A0C4DH42 116 aa12.78□□□□□ -0.36
VCAN-204ENST00000502527 HSBP1L1C9JCN9 74 aa12.78□□□□□ -0.36
VCAN-204ENST00000502527 PRAC2D3DTV9 90 aa12.78□□□□□ -0.36
VCAN-204ENST00000502527 ERCC8Q13216 396 aa12.78□□□□□ -0.36
VCAN-204ENST00000502527 PIMREGQ9BSJ6 248 aa12.78□□□□□ -0.36
VCAN-204ENST00000502527 IFI27P40305 119 aaPredicted RBP12.77□□□□□ -0.36
VCAN-204ENST00000502527 MRPL51Q4U2R6 128 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 270.1 ms