RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 C2orf70A6NJV1 201 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 A8MWV9 139 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 C5orf58C9J3I9 102 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 GNG7O60262 68 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 OR1I1O60431 355 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 MRPS14O60783 128 aaKnown RBP0.71□□□□□ -2.3
VPS26A-208ENST00000497022 TIMM17BO60830 172 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 LYZL6O75951 148 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 GADD45GO95257 159 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 LINC00694P0DN24 101 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 ARPP19P56211 112 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 PSG9Q00887 426 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 MYL5Q02045 173 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 PDE6HQ13956 83 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 RPL13AP3Q6NVV1 102 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 SNX29P2Q8IUI4 249 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 Q8N2B8 174 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 TEX29Q8N6K0 151 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 C15orf53Q8NAA6 179 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 PPTC7Q8NI37 304 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 SFT2D1Q8WV19 159 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 C14orf144Q96I85 54 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 SLC25A21Q9BQT8 299 aaPredicted RBP0.71□□□□□ -2.3
VPS26A-208ENST00000497022 LINC00467Q9BRT7 94 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 ADAT1Q9BUB4 502 aaKnown RBP0.71□□□□□ -2.3
VPS26A-208ENST00000497022 RTL8AQ9BWD3 113 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 SMIM3Q9BZL3 60 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 OR2H1Q9GZK4 316 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 CYSTM1Q9H1C7 97 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 C14orf132Q9NPU4 83 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 CBLN4Q9NTU7 201 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 COA4Q9NYJ1 87 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 LAMTOR3Q9UHA4 124 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 ERG28Q9UKR5 140 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 HSPB11Q9Y547 144 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 COL1A1P02452 1464 aaPredicted RBP0.71□□□□□ -2.3
VPS26A-208ENST00000497022 ERCC6Q03468 1493 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 CAMSAP2Q08AD1 1489 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 FREM3P0C091 2139 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 RIMS1Q86UR5 1692 aaKnown RBP0.71□□□□□ -2.3
VPS26A-208ENST00000497022 DISP2A7MBM2 1401 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 TRAPPC8Q9Y2L5 1435 aa0.71□□□□□ -2.3
VPS26A-208ENST00000497022 MED23Q9ULK4 1368 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 DSPPQ9NZW4 1301 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 COL24A1Q17RW2 1714 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 DLG5Q8TDM6 1919 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 ALPK3Q96L96 1907 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 UHRF1BP1LA0JNW5 1464 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 TRAV12-1A0A0B4J245 112 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 TMEM189A5PLL7 270 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 EFCAB10A6NFE3 127 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 TLCD2A6NGC4 264 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 MIF4GDA9UHW6 222 aaKnown RBP0.7□□□□□ -2.3
VPS26A-208ENST00000497022 CCDC179H3BU77 68 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 PFDN1O60925 122 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 RNASE3P12724 160 aaKnown RBP0.7□□□□□ -2.3
VPS26A-208ENST00000497022 BRS3P32247 399 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 SRP9P49458 86 aaKnown RBP0.7□□□□□ -2.3
VPS26A-208ENST00000497022 TMBIM6P55061 237 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 RRAS2P62070 204 aaPredicted RBP0.7□□□□□ -2.3
VPS26A-208ENST00000497022 RPS28P62857 69 aaKnown RBP0.7□□□□□ -2.3
VPS26A-208ENST00000497022 CDK5R1Q15078 307 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 NEDD8Q15843 81 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 RTL8BQ17RB0 113 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 DEFB113Q30KQ7 82 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 C10orf55Q5SWW7 151 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 C1orf140Q5VVS0 124 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 UNQ6190/PRO20217Q6UXQ8 127 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 PHF5AQ7RTV0 110 aaKnown RBP0.7□□□□□ -2.3
VPS26A-208ENST00000497022 IFT20Q8IY31 132 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 TMEM229BQ8NBD8 167 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 LINC00301Q8NCQ3 95 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 TSTD1Q8NFU3 115 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 OR2T35Q8NGX2 323 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 SDF2Q99470 211 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 C12orf57Q99622 126 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 VPS25Q9BRG1 176 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 REG4Q9BYZ8 158 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 MED9Q9NWA0 146 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 LAMTOR2Q9Y2Q5 125 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 LY96Q9Y6Y9 160 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 SHROOM2Q13796 1616 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 CC2D2AQ9P2K1 1620 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 MCM3APO60318 1980 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 KIDINS220Q9ULH0 1771 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 SNRNP200O75643 2136 aaKnown RBP0.7□□□□□ -2.3
VPS26A-208ENST00000497022 CCNB3Q8WWL7 1395 aa0.7□□□□□ -2.3
VPS26A-208ENST00000497022 POLEQ07864 2286 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 ROBO1Q9Y6N7 1651 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 SIP14410 1827 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 KIF13AQ9H1H9 1805 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 NCAPD3P42695 1498 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 GRIN2AQ12879 1464 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 RAPGEF2Q9Y4G8 1499 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 IGKV2D-26A0A0A0MRZ7 120 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 TRAV5A0A0B4J249 113 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 TRBV7-6A0A0J9YX20 115 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 A6NN06 94 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 ZNF727A8MUV8 499 aa0.69□□□□□ -2.3
VPS26A-208ENST00000497022 E7EQ34 232 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 195.2 ms