RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 CST7O76096 145 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 NCR2O95944 276 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TRGC2P03986 189 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 MSMBP08118 114 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 IGLC6P0CF74 106 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 FABP2P12104 132 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HLA-EP13747 358 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BOP23527 126 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 NFYBP25208 207 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 FKBP2P26885 142 aaKnown RBP0.55□□□□□ -2.32
CCDC39-206ENST00000489868 CASP1P29466 404 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BBP33778 126 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 INSL3P51460 131 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TMBIM6P55061 237 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 NDUFA6P56556 154 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BDP58876 126 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TPPP2P59282 170 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 S100A10P60903 97 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BCP62807 126 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 MYL5Q02045 173 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HSD52Q0P140 79 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 MSMO1Q15800 293 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HIST2H2BEQ16778 126 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 RRN3P1Q2M238 152 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 MEIG1Q5JSS6 88 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 SPANXN3Q5MJ09 141 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.55□□□□□ -2.32
CCDC39-206ENST00000489868 AADACL3Q5VUY0 350 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 LCN15Q6UWW0 184 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM14EPQ6UXP3 125 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 LCA10Q71F78 164 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 LINC00305Q7Z4B0 112 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TRAPPC6BQ86SZ2 158 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 MMGT1Q8N4V1 131 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TEX29Q8N6K0 151 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.55□□□□□ -2.32
CCDC39-206ENST00000489868 OR4S1Q8NGB4 309 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 OR5D14Q8NGL3 314 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 OR2T10Q8NGZ9 312 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 BRK1Q8WUW1 75 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 PP6455Q8WZ26 134 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BHQ93079 126 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 MAGOHBQ96A72 148 aaKnown RBP0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TOMM6Q96B49 74 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 ZC2HC1AQ96GY0 325 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TEX37Q96LM6 180 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 C2orf50Q96LR7 162 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 OR4C12Q96R67 309 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BNQ99877 126 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BMQ99879 126 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 MRPL57Q9BQC6 102 aaKnown RBP0.55□□□□□ -2.32
CCDC39-206ENST00000489868 GINS4Q9BRT9 223 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 DERL1Q9BUN8 251 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 SNHG12Q9BXW3 62 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TCEAL2Q9H3H9 227 aaPredicted RBP0.55□□□□□ -2.32
CCDC39-206ENST00000489868 BANF2Q9H503 90 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 RERGLQ9H628 205 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 XAGE1AQ9HD64 81 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 OTORQ9NRC9 128 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 CBLN4Q9NTU7 201 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 METTL1Q9UBP6 276 aaKnown RBP0.55□□□□□ -2.32
CCDC39-206ENST00000489868 TP73-AS1Q9UF72 201 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 BOKQ9UMX3 212 aaPredicted RBP0.55□□□□□ -2.32
CCDC39-206ENST00000489868 FUT9Q9Y231 359 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 V9GYS6 101 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 PRG4Q92954 1404 aaPredicted RBP0.55□□□□□ -2.32
CCDC39-206ENST00000489868 ALPK2Q86TB3 2170 aa0.55□□□□□ -2.32
CCDC39-206ENST00000489868 RB1CC1Q8TDY2 1594 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TRAV27A0A087WT01 109 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 A0A087X0T9 212 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TRAV13-1A0A0B4J241 112 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 IGHV1-58A0A0C4DH39 117 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TRBV7-6A0A0J9YX20 115 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TRBV10-2A0A0K0K1G8 114 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 SMIM31A0A1B0GVY4 71 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 IRGMA1A4Y4 181 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 C7orf71A4D174 169 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 OR2T8A6NH00 312 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 A8MWV9 139 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 H3BMG7 143 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CCDC179H3BU77 68 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 K7ERJ3 54 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 M0R129 80 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 M0R378 163 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CDC42EP2O14613 210 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 NDUFB3O43676 98 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 MPC2O95563 127 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 IGKV1-5P01602 117 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 MT-ND6P03923 174 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TCRAP04437 139 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 PRM2P04554 102 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CD2P06729 351 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CTSDP07339 412 aaPredicted RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CD14P08571 375 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 SRP19P09132 144 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CXCL1P09341 107 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 SPINK8P0C7L1 97 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 PYYP10082 97 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H1DP16402 221 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CRYGSP22914 178 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms