RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 PMCHP20382 165 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 BMI1P35226 326 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 ATP5G2Q06055 141 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 FAM209BQ5JX69 171 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 MRPL52Q86TS9 123 aaKnown RBP5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 LURAP1LQ8IV03 231 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 KIR2DL5AQ8N109 375 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 PIFOQ8TCI5 191 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 PGLYRP4Q96LB8 373 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 METTL26Q96S19 204 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 C20orf144Q9BQM9 153 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 PRO1933Q9H354 126 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 HIF1ANQ9NWT6 349 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 ZNF580Q9UK33 172 aa5.73□□□□□ -1.49
SHROOM3-206ENST00000484236 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 B4DSR2 109 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 IGHV3-23P01764 117 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 MSMBP08118 114 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 SLC25A16P16260 332 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 CRIP1P50238 77 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 BCL6BQ8N143 479 aaPredicted RBP5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 C14orf144Q96I85 54 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 USMG5Q96IX5 58 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 CCDC140Q96MF4 163 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 RCHY1Q96PM5 261 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 PRR25Q96S07 402 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 SMAD5-AS1Q9Y6J3 95 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 U3KQE9 123 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 PKD1L2Q7Z442 2459 aa5.72□□□□□ -1.49
SHROOM3-206ENST00000484236 IGHV4-30-2A0A087WSY4 118 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 TRAV40A0A0B4J280 105 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 CLPSL1A2RUU4 121 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 TMEM189A5PLL7 270 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 A6NDX4 124 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 G3V318 75 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 IGHG2P01859 326 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 OR5AL1P0C617 328 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 LCN12Q6JVE5 192 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 CLEC19AQ6UXS0 136 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 ZNF493Q6ZR52 646 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 NIT1Q86X76 327 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 VAMP8Q9BV40 100 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 SSBP4Q9BWG4 385 aaPredicted RBP5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 PPP1R14DQ9NXH3 145 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 ABCA2Q9BZC7 2435 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 LRBAP50851 2863 aa5.71□□□□□ -1.5
SHROOM3-206ENST00000484236 LINC01548A6NM66 108 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 J3QLI3 93 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 M0R2Z0 102 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 NDUFA4O00483 81 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 SH2D1AO60880 128 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 IGHG4P01861 327 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 TRGV3P03979 118 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 CTRLP40313 264 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 KRTDAPP60985 99 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 PMCHL1Q16048 86 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 RNASEKQ6P5S7 137 aaKnown RBP5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 Q8N976 141 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 ASCL2Q99929 193 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 SMG1Q96Q15 3661 aaKnown RBP5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 MED13LQ71F56 2210 aa5.7□□□□□ -1.5
SHROOM3-206ENST00000484236 DCHS2Q6V1P9 2916 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 ITPR1Q14643 2758 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 IGKV2-40A0A087WW87 121 aaPredicted RBP5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 A0A0G2JLM5 398 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 C20orf202A1L168 122 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 FABP5P3A8MUU1 101 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 IGKV2D-40P01614 121 aaPredicted RBP5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 ARMS2P0C7Q2 107 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 LINC00614P0C842 121 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 C3orf79P0CE67 100 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 IGHV4-38-2P0DP08 117 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 NTF3P20783 257 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 PPIFP30405 207 aaKnown RBP5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 BRD3OSQ6XYD6 125 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 TMEM219Q86XT9 240 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 MIEN1Q9BRT3 115 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 C2orf88Q9BSF0 95 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 DOPEY1Q5JWR5 2465 aa5.69□□□□□ -1.5
SHROOM3-206ENST00000484236 ZZEF1O43149 2961 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 IGHV3OR16-10A0A075B7F0 116 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 TMEM89A2RUT3 159 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 H3BUX3 64 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 CRXO43186 299 aaPredicted RBP5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 IGLC6P0CF74 106 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 BTF3P20290 206 aaKnown RBP5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 ARL3P36405 182 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 HIST1H1AQ02539 215 aaPredicted RBP5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 LINC01559Q495D7 138 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 C9orf47Q6ZRZ4 202 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 C9orf139Q6ZV77 190 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 FAM19A2Q8N3H0 131 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 KLHDC1Q8N7A1 406 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 LINC01356Q8N9X3 169 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 URB1-AS1Q96HZ7 61 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 VGLL1Q99990 258 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 CNFNQ9BYD5 112 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms