RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 C1orf64Q8NEQ6 169 aa3.79□□□□□ -1.8
RC3H1-204ENST00000479099 LSM10Q969L4 123 aaKnown RBP3.79□□□□□ -1.8
RC3H1-204ENST00000479099 ARID1AO14497 2285 aa3.79□□□□□ -1.8
RC3H1-204ENST00000479099 PTPRSQ13332 1948 aa3.79□□□□□ -1.8
RC3H1-204ENST00000479099 NYNRINQ9P2P1 1898 aaKnown RBP3.79□□□□□ -1.8
RC3H1-204ENST00000479099 KIF26BQ2KJY2 2108 aa3.79□□□□□ -1.8
RC3H1-204ENST00000479099 SPHKAPQ2M3C7 1700 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 TCF20Q9UGU0 1960 aaKnown RBP3.78□□□□□ -1.8
RC3H1-204ENST00000479099 MYO5AQ9Y4I1 1855 aaKnown RBP3.78□□□□□ -1.8
RC3H1-204ENST00000479099 LOC107986453A0A1B0GWG9 222 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 OOSP1A8MZH6 123 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 H3BQ85 93 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 LINC00032P0C843 101 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 IGLC1P0CG04 106 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 FUT5Q11128 374 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 SS18Q15532 418 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 DEFB116Q30KQ4 102 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 KRTAP24-1Q3LI83 254 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 C6orf52Q5T4I8 152 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 MIC13Q5XKP0 118 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 Q6ZR03 302 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 AQP3Q92482 292 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 CHCHD1Q96BP2 118 aaKnown RBP3.78□□□□□ -1.8
RC3H1-204ENST00000479099 LINC00467Q9BRT7 94 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 VAMP8Q9BV40 100 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 TNFRSF19Q9NS68 423 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 MED9Q9NWA0 146 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 MYO10Q9HD67 2058 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 RIC1Q4ADV7 1423 aa3.78□□□□□ -1.8
RC3H1-204ENST00000479099 LTBP4Q8N2S1 1624 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 ARHGAP5Q13017 1502 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 SCN9AQ15858 1988 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 TRBV6-6A0A0A6YYG2 114 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 SMIM31A0A1B0GVY4 71 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 A6NN06 94 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 DNAH10OSP0CZ25 163 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 ZNF117Q03924 483 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 OR2T2Q6IF00 324 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 Q6P435 159 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 OR5AK2Q8NH90 309 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 CLEC2BQ92478 149 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 NHP2Q9NX24 153 aaKnown RBP3.77□□□□□ -1.81
RC3H1-204ENST00000479099 AP4S1Q9Y587 144 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 LINC00312Q9Y6C7 94 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 MYH1P12882 1939 aa3.77□□□□□ -1.81
RC3H1-204ENST00000479099 RBBP6Q7Z6E9 1792 aaKnown RBP3.76□□□□□ -1.81
RC3H1-204ENST00000479099 TMEM235A6NFC5 223 aa3.76□□□□□ -1.81
RC3H1-204ENST00000479099 H3BPC8 53 aa3.76□□□□□ -1.81
RC3H1-204ENST00000479099 IGHV3-53P01767 116 aa3.76□□□□□ -1.81
RC3H1-204ENST00000479099 FXYD2P54710 66 aa3.76□□□□□ -1.81
RC3H1-204ENST00000479099 CIRBPQ14011 172 aaKnown RBP3.76□□□□□ -1.81
RC3H1-204ENST00000479099 ATP11AUNQ6ZP68 121 aa3.76□□□□□ -1.81
RC3H1-204ENST00000479099 NABP2Q9BQ15 211 aa3.76□□□□□ -1.81
RC3H1-204ENST00000479099 TPRKBQ9Y3C4 175 aa3.76□□□□□ -1.81
RC3H1-204ENST00000479099 FAM215AQ9Y5M1 114 aa3.76□□□□□ -1.81
RC3H1-204ENST00000479099 CHD1O14646 1710 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 TRAV7A0A075B6U4 112 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 ZNF736B4DX44 427 aaPredicted RBP3.75□□□□□ -1.81
RC3H1-204ENST00000479099 RPL36A-HNRNPH2H7BZ11 118 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 PANO1I0J062 215 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 LYRM1O43325 122 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 CPSF4O95639 269 aaKnown RBP3.75□□□□□ -1.81
RC3H1-204ENST00000479099 IGLV7-43P04211 117 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 SHBGP04278 402 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 GYPBP06028 91 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 COL8A2P25067 703 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 FP248Q71RG6 208 aaPredicted RBP3.75□□□□□ -1.81
RC3H1-204ENST00000479099 CYB561D1Q8N8Q1 229 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 RETNLBQ9BQ08 111 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 TMEM106BQ9NUM4 274 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 ASF1BQ9NVP2 202 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 CABIN1Q9Y6J0 2220 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 TRPM3Q9HCF6 1732 aaPredicted RBP3.75□□□□□ -1.81
RC3H1-204ENST00000479099 SCN1AP35498 2009 aa3.75□□□□□ -1.81
RC3H1-204ENST00000479099 ZSWIM8A7E2V4 1837 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 FYCO1Q9BQS8 1478 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 HELZP42694 1942 aaKnown RBP3.74□□□□□ -1.81
RC3H1-204ENST00000479099 MUC21A0A0G2JKD1 596 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 TRBV10-2A0A0K0K1G8 114 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 EDF1O60869 148 aaKnown RBP3.74□□□□□ -1.81
RC3H1-204ENST00000479099 IL7P13232 177 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 PEBP1P30086 187 aaKnown RBP3.74□□□□□ -1.81
RC3H1-204ENST00000479099 CKS2P33552 79 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 ETV6P41212 452 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 NPC2P61916 151 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 HYLS1Q96M11 299 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 ABCC3O15438 1527 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 NUP214P35658 2090 aaPredicted RBP3.74□□□□□ -1.81
RC3H1-204ENST00000479099 GREB1Q4ZG55 1949 aa3.74□□□□□ -1.81
RC3H1-204ENST00000479099 CCDC141Q6ZP82 1450 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 HEATR5AQ86XA9 2040 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 RTEL1-TNFRSF6BF6WH68 1400 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 E7EQL1 145 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 GNRH2O43555 120 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 CLPSP04118 112 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 LPAL2Q16609 132 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 Q8IYB0 196 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 ATP6V0E2Q8NHE4 81 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 ATG5Q9H1Y0 275 aa3.73□□□□□ -1.81
RC3H1-204ENST00000479099 TIMM9Q9Y5J7 89 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms