RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 OTORQ9NRC9 128 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 OSTCQ9NRP0 149 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 TRAPPC1Q9Y5R8 145 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 IGKV3-7A0A075B6H7 116 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 PCP4L1A6NKN8 68 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 M0QZK8 103 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 HOXA3O43365 443 aaPredicted RBP3.18□□□□□ -1.9
USP25-208ENST00000478932 LTAP01374 205 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 IGHG4P01861 327 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 TYMSP04818 313 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 GZMBP10144 247 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 RPL7P18124 248 aaKnown RBP3.18□□□□□ -1.9
USP25-208ENST00000478932 HOXA5P20719 270 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 RAB9AP51151 201 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 RAB4BP61018 213 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 SSTP61278 116 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 RPEL1Q2QD12 228 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 KIAA1644Q3SXP7 199 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 OR5R1Q8NH85 324 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 FMC1Q96HJ9 113 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 BTF3L4Q96K17 158 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 C12orf57Q99622 126 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 AAMDCQ9H7C9 122 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 RNF24Q9Y225 148 aa3.18□□□□□ -1.9
USP25-208ENST00000478932 IGKV2-40A0A087WW87 121 aaPredicted RBP3.17□□□□□ -1.9
USP25-208ENST00000478932 XKRY2A2RUG3 117 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 GRIFINA4D1Z8 144 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 HIGD1CA8MV81 97 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 DIRC3C9JPN6 131 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 SCGB2A1O75556 95 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 IGKV2D-40P01614 121 aaPredicted RBP3.17□□□□□ -1.9
USP25-208ENST00000478932 FABP4P15090 132 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 ARL3P36405 182 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 CDX1P47902 265 aaPredicted RBP3.17□□□□□ -1.9
USP25-208ENST00000478932 CAMPP49913 170 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 KLK9Q2XQG4 91 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 ACTL10Q5JWF8 245 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 TCF24Q7RTU0 167 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 S100A7AQ86SG5 101 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 OR4X2Q8NGF9 303 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 Q8TAT8 98 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 ZC2HC1AQ96GY0 325 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 NEU1Q99519 415 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 TCEAL7Q9BRU2 100 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 KLK9Q9UKQ9 250 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 COL6A5A8TX70 2615 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 PKD1L1Q8TDX9 2849 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 SMIM27A0A1W2PRY6 76 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 FAM223BA6NKX1 122 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 SNURFLB1AK76 121 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 PRAC2D3DTV9 90 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 J3QLI3 93 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 GATCO43716 136 aaKnown RBP3.17□□□□□ -1.9
USP25-208ENST00000478932 IGLV1-40P01703 118 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 P01737 135 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 CRIP1P50238 77 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 RPL11P62913 178 aaKnown RBP3.17□□□□□ -1.9
USP25-208ENST00000478932 RPL19P84098 196 aaKnown RBP3.17□□□□□ -1.9
USP25-208ENST00000478932 HIST2H2BDQ6DRA6 164 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 LCN12Q6JVE5 192 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 Q86TA4 180 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 FAM223AQ8IWN6 122 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 TMEM183AQ8IXX5 376 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 LYPD1Q8N2G4 141 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 TMEM256Q8N2U0 113 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 NUP35Q8NFH5 326 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 GTSF1Q8WW33 167 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 METTL26Q96S19 204 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 VGLL1Q99990 258 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 ZNF331Q9NQX6 463 aaPredicted RBP3.17□□□□□ -1.9
USP25-208ENST00000478932 GAR1Q9NY12 217 aaKnown RBP3.17□□□□□ -1.9
USP25-208ENST00000478932 NAT8BQ9UHF3 227 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 PSG8Q9UQ74 426 aa3.17□□□□□ -1.9
USP25-208ENST00000478932 K7EQM0 130 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 NUPR1O60356 82 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 ZNF705DP0CH99 300 aaPredicted RBP3.16□□□□□ -1.9
USP25-208ENST00000478932 ZNF705BP0CI00 300 aaPredicted RBP3.16□□□□□ -1.9
USP25-208ENST00000478932 SRD5A1P18405 259 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 MEOX2P50222 304 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 CRIP2P52943 208 aaPredicted RBP3.16□□□□□ -1.9
USP25-208ENST00000478932 RELQ04864 619 aaPredicted RBP3.16□□□□□ -1.9
USP25-208ENST00000478932 PDE6HQ13956 83 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 PSG3Q16557 428 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 TM4SF20Q53R12 229 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 Q6YL49 198 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 LRRC75A-AS1Q8N1F1 130 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 HIST3H2BBQ8N257 126 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 OR10D4PQ8NGN7 298 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 MBD6Q96DN6 1003 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 DAZAP1Q96EP5 407 aaKnown RBP3.16□□□□□ -1.9
USP25-208ENST00000478932 C8orf49Q96NF6 230 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 TPPP3Q9BW30 176 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 SSBP4Q9BWG4 385 aaPredicted RBP3.16□□□□□ -1.9
USP25-208ENST00000478932 PRSS22Q9GZN4 317 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 MRPL18Q9H0U6 180 aaKnown RBP3.16□□□□□ -1.9
USP25-208ENST00000478932 VPREB3Q9UKI3 123 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 BAHCC1Q9P281 2608 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 TMSB15BA0A087X1C1 80 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 MUC21A0A0G2JKD1 596 aa3.16□□□□□ -1.9
USP25-208ENST00000478932 MUC21A0A140T8X8 626 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms