RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 DEFA1P59665 94 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 AP3S2P59780 193 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 MLLT11Q13015 90 aaPredicted RBP-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 SPOPLQ6IQ16 392 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 S100A7AQ86SG5 101 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 ANKRD29Q8N6D5 301 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 CCL4L1Q8NHW4 92 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 STAG3L4Q8TBR4 150 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 FAM172AQ8WUF8 416 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 ZHX1-C8orf76Q96EF9 292 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 C2orf50Q96LR7 162 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 OR52E6Q96RD3 313 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 DSCR8Q96T75 97 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 POPDC3Q9HBV1 291 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 NAT8BQ9UHF3 227 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 SNAPC4Q5SXM2 1469 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 MYH9P35579 1960 aaKnown RBP-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 WDR87Q6ZQQ6 2873 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 A0A096LPI6 279 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 LOC100506127A0A0U1RQW1 187 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 NDUFS6O75380 124 aaKnown RBP-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 CRYZL1O95825 349 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 KLK9Q2XQG4 91 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 Q3ZCU0 254 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 CSAG1Q6PB30 78 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 LRRN1Q6UXK5 716 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 KRT222Q8N1A0 295 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 LINC00269Q8N2A0 174 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 LRRC18Q8N456 261 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 ISOC1Q96CN7 298 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 PLEKHJ1Q9NW61 149 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 PRO0255Q9UI72 69 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 PKIGQ9Y2B9 76 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 NOSIPQ9Y314 301 aaKnown RBP-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 PLCE1Q9P212 2302 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 PLXNA1Q9UIW2 1896 aa-1.26□□□□□ -2.61
NCKAP1-204ENST00000477988 DNAH9Q9NYC9 4486 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 A0A0G2JMM0 328 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 A0A1W2PPB8 328 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 KIR3DP1A8MWS1 328 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 F2Z2F3 143 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 J3QRK9 145 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 IGF2P01344 180 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 GYPBP06028 91 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 COX5BP10606 129 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 SRP14P37108 136 aaKnown RBP-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 EIF5AP63241 154 aaKnown RBP-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 PMS2P3Q13401 168 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 KRR1Q13601 381 aaKnown RBP-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 Q8IZM0 81 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 PIGXQ8TBF5 258 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 SLC25A40Q8TBP6 338 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 DNAJB3Q8WWF6 145 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 ZNF714Q96N38 554 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 PPP1R2P1Q96PQ5 205 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 YPEL2Q96QA6 119 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 CNFNQ9BYD5 112 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 EVC2Q86UK5 1308 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 SPTBN4Q9H254 2564 aa-1.27□□□□□ -2.61
NCKAP1-204ENST00000477988 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 PIK3C2GO75747 1445 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 FMN1Q68DA7 1419 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 FAM236DA0A1B0GTK5 79 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 DUXBA0A1W2PPF3 345 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 OR4C46A6NHA9 309 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 IQCF5A8MTL0 148 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 TMEM256-PLSCR3K7ERE1 68 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 PFDN6O15212 129 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 SSNA1O43805 119 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 FAM236CP0DP71 79 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 IDO1P14902 403 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 RPS12P25398 132 aaKnown RBP-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 PSMB6P28072 239 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 PSME3P61289 254 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 UBE2BP63146 152 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 H3F3AP84243 136 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 MYL5Q02045 173 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 NEDD8Q15843 81 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 OR4K15Q8NH41 348 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 CHCHD1Q96BP2 118 aaKnown RBP-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 CST11Q9H112 138 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 IMP3Q9NV31 184 aaKnown RBP-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 RABL2AQ9UBK7 228 aaPredicted RBP-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 URB1O60287 2271 aaKnown RBP-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 ABCA13Q86UQ4 5058 aa-1.28□□□□□ -2.61
NCKAP1-204ENST00000477988 HELZP42694 1942 aaKnown RBP-1.28□□□□□ -2.62
NCKAP1-204ENST00000477988 VPS13BQ7Z7G8 4022 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 TEX15Q9BXT5 2789 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 HIGD1CA8MV81 97 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 K7EQZ3 153 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 C1QBP02746 253 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 HLA-EP13747 358 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 PHBP35232 272 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 SULT1A1P50225 295 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 SNRPD3P62318 126 aaKnown RBP-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 KLRD1Q13241 179 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 SNCBQ16143 134 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 RRN3P1Q2M238 152 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.29□□□□□ -2.62
NCKAP1-204ENST00000477988 RAB8BQ92930 207 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms