RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 A0A1B0GUT8 65 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 EREGO14944 169 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 CT45A10P0DMU9 189 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 GATD1Q8NB37 220 aa12.84□□□□□ -0.35
TMEM53-208ENST00000476724 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
TMEM53-208ENST00000476724 FAM181BA6NEQ2 426 aa12.83□□□□□ -0.36
TMEM53-208ENST00000476724 SH2D7A6NKC9 451 aaPredicted RBP12.83□□□□□ -0.36
TMEM53-208ENST00000476724 CTRLP40313 264 aa12.83□□□□□ -0.36
TMEM53-208ENST00000476724 ZFHX3Q15911 3703 aa12.83□□□□□ -0.36
TMEM53-208ENST00000476724 OR2T8A6NH00 312 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 M0R3E3 92 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 BTF3P20290 206 aaKnown RBP12.82□□□□□ -0.36
TMEM53-208ENST00000476724 SAPCD1Q5SSQ6 148 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 CLEC2AQ6UVW9 174 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 COX8CQ7Z4L0 72 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 BCL6BQ8N143 479 aaPredicted RBP12.82□□□□□ -0.36
TMEM53-208ENST00000476724 AJUBAQ96IF1 538 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 CSMD1Q96PZ7 3565 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 RAB9AP51151 201 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 KRTAP10-9P60411 292 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 NUTF2P61970 127 aaKnown RBP12.82□□□□□ -0.36
TMEM53-208ENST00000476724 KLHDC1Q8N7A1 406 aa12.82□□□□□ -0.36
TMEM53-208ENST00000476724 SPATA45Q537H7 98 aa12.81□□□□□ -0.36
TMEM53-208ENST00000476724 UNQ5815/PRO19632Q6UWF5 114 aa12.81□□□□□ -0.36
TMEM53-208ENST00000476724 TMUB1Q9BVT8 246 aa12.81□□□□□ -0.36
TMEM53-208ENST00000476724 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
TMEM53-208ENST00000476724 CRIP1P50238 77 aa12.81□□□□□ -0.36
TMEM53-208ENST00000476724 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
TMEM53-208ENST00000476724 URB1-AS1Q96HZ7 61 aa12.81□□□□□ -0.36
TMEM53-208ENST00000476724 NDUFS8O00217 210 aa12.8□□□□□ -0.36
TMEM53-208ENST00000476724 LINC00614P0C842 121 aa12.8□□□□□ -0.36
TMEM53-208ENST00000476724 SAA4P35542 130 aa12.8□□□□□ -0.36
TMEM53-208ENST00000476724 ZNF502Q8TBZ5 544 aa12.8□□□□□ -0.36
TMEM53-208ENST00000476724 C20orf202A1L168 122 aa12.79□□□□□ -0.36
TMEM53-208ENST00000476724 C2orf70A6NJV1 201 aa12.79□□□□□ -0.36
TMEM53-208ENST00000476724 EBLN2Q6P2I7 272 aa12.79□□□□□ -0.36
TMEM53-208ENST00000476724 UQCR10Q9UDW1 63 aa12.79□□□□□ -0.36
TMEM53-208ENST00000476724 NPFFO15130 113 aa12.79□□□□□ -0.36
TMEM53-208ENST00000476724 OR5AL1P0C617 328 aa12.79□□□□□ -0.36
TMEM53-208ENST00000476724 USP9YO00507 2555 aaPredicted RBP12.78□□□□□ -0.36
TMEM53-208ENST00000476724 CELSR2Q9HCU4 2923 aa12.78□□□□□ -0.36
TMEM53-208ENST00000476724 CENPVL3A0A0U1RRI6 287 aa12.78□□□□□ -0.36
TMEM53-208ENST00000476724 ARMS2P0C7Q2 107 aa12.78□□□□□ -0.36
TMEM53-208ENST00000476724 C15orf32Q32M92 178 aa12.78□□□□□ -0.36
TMEM53-208ENST00000476724 Q71RC1 249 aaPredicted RBP12.78□□□□□ -0.36
TMEM53-208ENST00000476724 C8orf49Q96NF6 230 aa12.78□□□□□ -0.36
TMEM53-208ENST00000476724 TMEM70Q9BUB7 260 aa12.78□□□□□ -0.36
TMEM53-208ENST00000476724 TMEM189A5PLL7 270 aa12.77□□□□□ -0.36
TMEM53-208ENST00000476724 ATP6V0E1O15342 81 aa12.77□□□□□ -0.36
TMEM53-208ENST00000476724 CRXO43186 299 aaPredicted RBP12.77□□□□□ -0.37
TMEM53-208ENST00000476724 IGLC3P0DOY3 106 aa12.77□□□□□ -0.37
TMEM53-208ENST00000476724 PLA2G2AP14555 144 aa12.77□□□□□ -0.37
TMEM53-208ENST00000476724 RHOGP84095 191 aa12.77□□□□□ -0.37
TMEM53-208ENST00000476724 ECSCRQ19T08 205 aa12.77□□□□□ -0.37
TMEM53-208ENST00000476724 ZNF493Q6ZR52 646 aa12.77□□□□□ -0.37
TMEM53-208ENST00000476724 PRR25Q96S07 402 aa12.77□□□□□ -0.37
TMEM53-208ENST00000476724 SMAD5-AS1Q9Y6J3 95 aa12.77□□□□□ -0.37
TMEM53-208ENST00000476724 POLQO75417 2590 aa12.76□□□□□ -0.37
TMEM53-208ENST00000476724 A0A087X0K7 114 aa12.76□□□□□ -0.37
TMEM53-208ENST00000476724 BMI1P35226 326 aa12.76□□□□□ -0.37
TMEM53-208ENST00000476724 RPS20P60866 119 aaKnown RBP12.76□□□□□ -0.37
TMEM53-208ENST00000476724 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
TMEM53-208ENST00000476724 ANKRD17O75179 2603 aaKnown RBP12.76□□□□□ -0.37
TMEM53-208ENST00000476724 TRAV9-2A0A087WT02 112 aa12.76□□□□□ -0.37
TMEM53-208ENST00000476724 IGHV1-24A0A0C4DH33 117 aa12.76□□□□□ -0.37
TMEM53-208ENST00000476724 CLEC3BP05452 202 aa12.76□□□□□ -0.37
TMEM53-208ENST00000476724 GPR183P32249 361 aa12.76□□□□□ -0.37
TMEM53-208ENST00000476724 TENM4Q6N022 2769 aa12.76□□□□□ -0.37
TMEM53-208ENST00000476724 CENPEQ02224 2701 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 TRBV7-1A0A0A6YYK4 115 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 SH2D1AO60880 128 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 LEPROTL1O95214 131 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 PAX8Q06710 450 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 EEF1AKMT3Q96AZ1 226 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 ATP6V0BQ99437 205 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 ASCL2Q99929 193 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 ZFAND3Q9H8U3 227 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 DOPEY2Q9Y3R5 2298 aa12.75□□□□□ -0.37
TMEM53-208ENST00000476724 TCAPO15273 167 aa12.74□□□□□ -0.37
TMEM53-208ENST00000476724 BUB3O43684 328 aa12.74□□□□□ -0.37
TMEM53-208ENST00000476724 SRSF2Q01130 221 aaKnown RBP12.74□□□□□ -0.37
TMEM53-208ENST00000476724 LCN12Q6JVE5 192 aa12.74□□□□□ -0.37
TMEM53-208ENST00000476724 PTPN13Q12923 2485 aa12.74□□□□□ -0.37
TMEM53-208ENST00000476724 IGHV3OR16-10A0A075B7F0 116 aa12.74□□□□□ -0.37
TMEM53-208ENST00000476724 IGKV2-40A0A087WW87 121 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-208ENST00000476724 IGKV2D-40P01614 121 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-208ENST00000476724 PRR31Q5SQ13 230 aa12.74□□□□□ -0.37
TMEM53-208ENST00000476724 C5orf56Q8N8D9 126 aa12.74□□□□□ -0.37
TMEM53-208ENST00000476724 RPLP1P05386 114 aaKnown RBP12.73□□□□□ -0.37
TMEM53-208ENST00000476724 HIST2H2BCQ6DN03 193 aa12.73□□□□□ -0.37
TMEM53-208ENST00000476724 SLC50A1Q9BRV3 221 aa12.73□□□□□ -0.37
TMEM53-208ENST00000476724 MAP1AP78559 2803 aaPredicted RBP12.73□□□□□ -0.37
TMEM53-208ENST00000476724 RBAKDNA6NC62 111 aa12.73□□□□□ -0.37
TMEM53-208ENST00000476724 M0QZ24 198 aa12.73□□□□□ -0.37
TMEM53-208ENST00000476724 IGHG4P01861 327 aa12.73□□□□□ -0.37
TMEM53-208ENST00000476724 LYZL1Q6UWQ5 148 aa12.73□□□□□ -0.37
TMEM53-208ENST00000476724 CLEC5AQ9NY25 188 aa12.73□□□□□ -0.37
TMEM53-208ENST00000476724 HSPB8Q9UJY1 196 aa12.73□□□□□ -0.37
TMEM53-208ENST00000476724 SYS1-DBNDD2H3BUS1 97 aa12.72□□□□□ -0.37
TMEM53-208ENST00000476724 TPPP3Q9BW30 176 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms