RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 NCR2O95944 276 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 HBDP02042 147 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 LINC00694P0DN24 101 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 KRTAP12-2P59991 146 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 ELOBQ15370 118 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 IQSEC2Q5JU85 1478 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 MYOM3Q5VTT5 1437 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 ARL11Q969Q4 196 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 DISP1Q96F81 1524 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 OR4C12Q96R67 309 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 C2orf88Q9BSF0 95 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 TPRKBQ9Y3C4 175 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 MYO5AQ9Y4I1 1855 aaKnown RBP2.55□□□□□ -2
SRGAP3-205ENST00000475560 KIF13AQ9H1H9 1805 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 PHLPP1O60346 1717 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 NESP48681 1621 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 ADGRB3O60242 1522 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.54□□□□□ -2
SRGAP3-205ENST00000475560 TRGV4A0A0C4DH28 118 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 SMIM24O75264 130 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 GPX1P07203 203 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 SAA1P0DJI8 122 aaPredicted RBP2.54□□□□□ -2
SRGAP3-205ENST00000475560 AKR1D1P51857 326 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 DEFB113Q30KQ7 82 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 C1orf134Q5TEV5 83 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 LYPD1Q8N2G4 141 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 LINC00311Q8N616 119 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 TMEM254Q8TBM7 123 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 CLEC2BQ92478 149 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 MUCL1Q96DR8 90 aa2.54□□□□□ -2
SRGAP3-205ENST00000475560 LRP5O75197 1615 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 TRAV12-1A0A0B4J245 112 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 LOC107986453A0A1B0GWG9 222 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 H3BRN7 92 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 HLA-DRB4P13762 266 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 COPZ1P61923 177 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 LSM3P62310 102 aaKnown RBP2.53□□□□□ -2
SRGAP3-205ENST00000475560 SNRPD3P62318 126 aaKnown RBP2.53□□□□□ -2
SRGAP3-205ENST00000475560 NEDD8Q15843 81 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 LINC00470Q9BZP3 86 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 FKBP11Q9NYL4 201 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 HLA-DRB4X5D2U9 266 aa2.53□□□□□ -2
SRGAP3-205ENST00000475560 SCN8AQ9UQD0 1980 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 PXDNLA1KZ92 1463 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 ARHGAP31Q2M1Z3 1444 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 ROCK2O75116 1388 aaKnown RBP2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 SHANK1Q9Y566 2161 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 FAM236AA0A1B0GUQ0 79 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 FAM236BA0A1B0GV22 79 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 C2orf70A6NJV1 201 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 NPFFO15130 113 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 GNG7O60262 68 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 APOC1P02654 83 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 DSCR4P56555 118 aaPredicted RBP2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 SELENOWP63302 87 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 CDK6Q00534 326 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 TMEM91Q6ZNR0 172 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 OR10AC1Q8NH08 325 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 RAB37Q96AX2 223 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 PRO0461Q9UI25 63 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 COL4A5P29400 1685 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 USP54Q70EL1 1684 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 PTPRBP23467 1997 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 GRIN2AQ12879 1464 aa2.52□□□□□ -2.01
SRGAP3-205ENST00000475560 A0A1W2PNU3 283 aaPredicted RBP2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 E7EUB6 86 aa2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 ZNF670-ZNF695F2Z2N8 137 aa2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 CCL4P13236 92 aa2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 HIST1H1BP16401 226 aaKnown RBP2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 ARPINQ7Z6K5 226 aa2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 TEN1Q86WV5 123 aa2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 COMMD3Q9UBI1 195 aa2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 NALCNQ8IZF0 1738 aa2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 RRBP1Q9P2E9 1410 aaKnown RBP2.51□□□□□ -2.01
SRGAP3-205ENST00000475560 MYLKQ15746 1914 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 EIF4G3O43432 1585 aaKnown RBP2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 A0A087WSZ3 146 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 TRAV27A0A087WT01 109 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 TRACP01848 142 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 SLC25A4P12235 298 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 AZU1P20160 251 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 BLCAPP62952 87 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 EMX2Q04743 252 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 Q1T7F1 81 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 SFT2D1Q8WV19 159 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 TXNDC17Q9BRA2 123 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 GGACTQ9BVM4 153 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 TTTY12Q9BZ98 90 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 PPIP5K1Q6PFW1 1433 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 SMG6Q86US8 1419 aaKnown RBP2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 WDR97A6NE52 1622 aa2.5□□□□□ -2.01
SRGAP3-205ENST00000475560 ERICH3Q5RHP9 1530 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 CACNA1GO43497 2377 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 C5orf67F2Z3F1 127 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 S100A1P23297 94 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 PDE6HQ13956 83 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 CIRBPQ14011 172 aaKnown RBP2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 OR5AK2Q8NH90 309 aa2.49□□□□□ -2.01
SRGAP3-205ENST00000475560 PSMF1Q92530 271 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms