RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 SCGB2A2Q13296 93 aa14.65□□□□□ -0.06
ECHDC1-214ENST00000474289 TCTEX1D4Q5JR98 221 aa14.65□□□□□ -0.06
ECHDC1-214ENST00000474289 TEX36Q5VZQ5 186 aa14.65□□□□□ -0.06
ECHDC1-214ENST00000474289 AMTNQ6UX39 209 aa14.65□□□□□ -0.06
ECHDC1-214ENST00000474289 PROCRQ9UNN8 238 aa14.65□□□□□ -0.06
ECHDC1-214ENST00000474289 VSTM5A8MXK1 200 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 SH2D1AO60880 128 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 IGKCP01834 107 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 CD59P13987 128 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 ATP5G2Q06055 141 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 RASL11BQ9BPW5 248 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 NPIPB5A8MRT5 1133 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 RBP4P02753 201 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 CNTFRP26992 372 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 LEPP41159 167 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 CCL11P51671 97 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 SRSF6Q13247 344 aaKnown RBP14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 TWIST1Q15672 202 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 SHANK2-AS3Q9BTD1 123 aa14.64□□□□□ -0.07
ECHDC1-214ENST00000474289 TRAV26-1A0A087WT03 109 aa14.63□□□□□ -0.07
ECHDC1-214ENST00000474289 PRSS1P07477 247 aa14.63□□□□□ -0.07
ECHDC1-214ENST00000474289 EVI2AP22794 236 aa14.63□□□□□ -0.07
ECHDC1-214ENST00000474289 ZC2HC1BQ5TFG8 222 aa14.63□□□□□ -0.07
ECHDC1-214ENST00000474289 LYPD1Q8N2G4 141 aa14.63□□□□□ -0.07
ECHDC1-214ENST00000474289 IGKV1-17P01599 117 aa14.63□□□□□ -0.07
ECHDC1-214ENST00000474289 FDCSPQ8NFU4 85 aa14.63□□□□□ -0.07
ECHDC1-214ENST00000474289 GAS8-AS1O95177 125 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 PRO0461Q9UI25 63 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 ZZEF1O43149 2961 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 H3BRN7 92 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 K7EM74 188 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 THBDP07204 575 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 MC5RP33032 325 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 SRSF1Q07955 248 aaKnown RBP eCLIP14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 GAGE13Q4V321 117 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 LINC00311Q8N616 119 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 TMEM190Q8WZ59 177 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 MAP1LC3AQ9H492 121 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 SH3BGRL2Q9UJC5 107 aa14.62□□□□□ -0.07
ECHDC1-214ENST00000474289 FCER1GP30273 86 aa14.61□□□□□ -0.07
ECHDC1-214ENST00000474289 C12orf74Q32Q52 190 aa14.61□□□□□ -0.07
ECHDC1-214ENST00000474289 KLF17Q5JT82 389 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-214ENST00000474289 MALRD1Q5VYJ5 2156 aa14.61□□□□□ -0.07
ECHDC1-214ENST00000474289 WT1P19544 449 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-214ENST00000474289 ZNF502Q8TBZ5 544 aa14.61□□□□□ -0.07
ECHDC1-214ENST00000474289 FOXC2Q99958 501 aa14.61□□□□□ -0.07
ECHDC1-214ENST00000474289 LINC01546A6NGU7 62 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 TEX22C9J3V5 150 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 I3L2K1 104 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 MRPS12O15235 138 aaKnown RBP14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 DPM2O94777 84 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 CRYBA4P53673 196 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 MRAP2Q96G30 205 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 ROS1P08922 2347 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 TMEM8BA6NDV4 472 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 EGR2P11161 476 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 CCL8P80075 99 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 MAPKAPK5-AS1Q8N8E1 139 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 RNF185Q96GF1 192 aa14.6□□□□□ -0.07
ECHDC1-214ENST00000474289 PRRG2O14669 202 aa14.59□□□□□ -0.07
ECHDC1-214ENST00000474289 HLA-DRB4P13762 266 aa14.59□□□□□ -0.07
ECHDC1-214ENST00000474289 PRO3102Q9H379 93 aa14.59□□□□□ -0.07
ECHDC1-214ENST00000474289 MSRB1Q9NZV6 116 aa14.59□□□□□ -0.07
ECHDC1-214ENST00000474289 SIGLEC9Q9Y336 463 aa14.59□□□□□ -0.07
ECHDC1-214ENST00000474289 HLA-DRB4X5D2U9 266 aa14.59□□□□□ -0.07
ECHDC1-214ENST00000474289 CDX4O14627 284 aaPredicted RBP14.58□□□□□ -0.07
ECHDC1-214ENST00000474289 SEM1Q6ZVN7 128 aa14.58□□□□□ -0.07
ECHDC1-214ENST00000474289 CRYGBP07316 175 aa14.58□□□□□ -0.08
ECHDC1-214ENST00000474289 C8orf31Q8N9H6 132 aa14.58□□□□□ -0.08
ECHDC1-214ENST00000474289 C20orf78Q9BR46 151 aa14.58□□□□□ -0.08
ECHDC1-214ENST00000474289 TRAV40A0A0B4J280 105 aa14.57□□□□□ -0.08
ECHDC1-214ENST00000474289 TMEM160Q9NX00 188 aa14.57□□□□□ -0.08
ECHDC1-214ENST00000474289 DMXL2Q8TDJ6 3036 aa14.57□□□□□ -0.08
ECHDC1-214ENST00000474289 RRN3P1Q2M238 152 aa14.57□□□□□ -0.08
ECHDC1-214ENST00000474289 TMEM158Q8WZ71 300 aa14.57□□□□□ -0.08
ECHDC1-214ENST00000474289 GEMIN7Q9H840 131 aaKnown RBP14.57□□□□□ -0.08
ECHDC1-214ENST00000474289 IGLC6P0CF74 106 aa14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 TAL2Q16559 108 aa14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 ZNF491Q8N8L2 437 aa14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 NXT2Q9NPJ8 142 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 IGKV2-40A0A087WW87 121 aaPredicted RBP14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 CEACAM4O75871 244 aa14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 TNFRSF6BO95407 300 aa14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 IGKV2D-40P01614 121 aaPredicted RBP14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 ZNF575Q86XF7 245 aa14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 RNF125Q96EQ8 232 aa14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 AAMDCQ9H7C9 122 aa14.56□□□□□ -0.08
ECHDC1-214ENST00000474289 A0A1B0GWB2 263 aa14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 ATP5LO75964 103 aa14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 IL4P05112 153 aa14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 ZNF474Q6S9Z5 364 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 PPP1R27Q86WC6 154 aa14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 TTC9CQ8N5M4 171 aa14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 MRPL16Q9NX20 251 aaKnown RBP14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 MRPL35Q9NZE8 188 aaKnown RBP14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 ZNF80P51504 273 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 HIST1H4GQ99525 98 aa14.55□□□□□ -0.08
ECHDC1-214ENST00000474289 APOMO95445 188 aa14.54□□□□□ -0.08
ECHDC1-214ENST00000474289 GATA1P15976 413 aaPredicted RBP14.54□□□□□ -0.08
ECHDC1-214ENST00000474289 PPIFP30405 207 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms