RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 PRNDQ9UKY0 176 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 USP24Q9UPU5 2620 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 MYO5AQ9Y4I1 1855 aaKnown RBP0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 NISCHQ9Y2I1 1504 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 B4DSR2 109 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 IGLV1-51P01701 117 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 IGHV3-33P01772 117 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 CYBAP13498 195 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 CAV3P56539 151 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 SPINK13Q1W4C9 94 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 CASC2Q6XLA1 102 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 OR4B1Q8NGF8 309 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 OR5AK2Q8NH90 309 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 CCL19Q99731 98 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 PAIP2Q9BPZ3 127 aaKnown RBP0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 OR2H1Q9GZK4 316 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 LPAR5Q9H1C0 372 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 NUP210LQ5VU65 1888 aa0.28□□□□□ -2.36
ECHDC1-213ENST00000474240 BCL9O00512 1426 aa0.28□□□□□ -2.37
ECHDC1-213ENST00000474240 COL24A1Q17RW2 1714 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 ODAMA1E959 279 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 H3BQV1 296 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 K7ERJ3 54 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 PFDN1O60925 122 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 IFNA1P01562 189 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 C1QBP02746 253 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 HBBP68871 147 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 MRPS36P82909 103 aaKnown RBP0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 TMED4Q7Z7H5 227 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 RMND5BQ96G75 393 aaPredicted RBP0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 OR4C12Q96R67 309 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 RTL8AQ9BWD3 113 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 CD109Q6YHK3 1445 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 NAV3Q8IVL0 2385 aa0.27□□□□□ -2.37
ECHDC1-213ENST00000474240 UNC13CQ8NB66 2214 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 TCTAP57738 103 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 RPL19P84098 196 aaKnown RBP0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 MIR22HGQ0VDD5 57 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 NEDD8Q15843 81 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 RTL8BQ17RB0 113 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 C1orf140Q5VVS0 124 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 HACD4Q5VWC8 232 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 FOXI2Q6ZQN5 318 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 GPX7Q96SL4 187 aaPredicted RBP0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 NAT8BQ9UHF3 227 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 KIAA1107Q9UPP5 1409 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 FANCMQ8IYD8 2048 aa0.26□□□□□ -2.37
ECHDC1-213ENST00000474240 ADGRL3Q9HAR2 1447 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 A0A0J9YY99 117 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 BBIP1A8MTZ0 92 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 PIAS1O75925 651 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 CD3DP04234 171 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 FABP4P15090 132 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 PDE6GP18545 87 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 RPS3P23396 243 aaKnown RBP eCLIP0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 INSL3P51460 131 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 ARF6P62330 175 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 MRPS15P82914 257 aaKnown RBP0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 POU6F1Q14863 301 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 MSMO1Q15800 293 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 FKBP1CQ5VVH2 108 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 DHRS4L2Q6PKH6 230 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 C3orf62Q6ZUJ4 267 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 PRR15Q8IV56 129 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 NUP35Q8NFH5 326 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 PLAC4Q8WY50 150 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 FAM103A1Q9BTL3 118 aaKnown RBP0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 DOCK4Q8N1I0 1966 aa0.25□□□□□ -2.37
ECHDC1-213ENST00000474240 RTL9Q8NET4 1388 aa0.24□□□□□ -2.37
ECHDC1-213ENST00000474240 MUC4Q99102 2169 aa0.24□□□□□ -2.37
ECHDC1-213ENST00000474240 FREM3P0C091 2139 aa0.24□□□□□ -2.37
ECHDC1-213ENST00000474240 NDUFA6P56556 154 aa0.24□□□□□ -2.37
ECHDC1-213ENST00000474240 ZGRF1Q86YA3 2104 aa0.24□□□□□ -2.37
ECHDC1-213ENST00000474240 GINS3Q9BRX5 216 aa0.24□□□□□ -2.37
ECHDC1-213ENST00000474240 ZNF462Q96JM2 2506 aa0.24□□□□□ -2.37
ECHDC1-213ENST00000474240 APCP25054 2843 aa0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 PTPRDP23468 1912 aa0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 NAV2Q8IVL1 2488 aa0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 C3orf85A0A1B0GTC6 90 aa0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 ARL5CA6NH57 179 aa0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 KPNA4O00629 521 aaPredicted RBP0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 TRACP01848 142 aa0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 SNRPD3P62318 126 aaKnown RBP0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 C10orf99Q6UWK7 81 aa0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 ISOC1Q96CN7 298 aa0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 LIMD2Q9BT23 127 aa0.23□□□□□ -2.37
ECHDC1-213ENST00000474240 YTHDC2Q9H6S0 1430 aaKnown RBP0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 N4BP2Q86UW6 1770 aaPredicted RBP0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 TET1Q8NFU7 2136 aa0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 GYPBP06028 91 aa0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 TPT1P13693 172 aaKnown RBP0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 CAPZBP47756 277 aa0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 LSM3P62310 102 aaKnown RBP0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 BASP1P80723 227 aaKnown RBP0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 XAF1Q6GPH4 301 aa0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 BORCS8Q96FH0 119 aa0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 CIB3Q96Q77 187 aaPredicted RBP0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 MED11Q9P086 117 aa0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 CACNA1EQ15878 2313 aa0.22□□□□□ -2.37
ECHDC1-213ENST00000474240 LOC285556D6RIA3 1793 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms