RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 AQP10Q96PS8 301 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 SEC11CQ9BY50 192 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 SLC35B3Q9H1N7 401 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 ATG5Q9H1Y0 275 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 BCL2L10Q9HD36 194 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 TPRKBQ9Y3C4 175 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 OTOFQ9HC10 1997 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 TSPOAP1O95153 1857 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 ZFYVE16Q7Z3T8 1539 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 ATAD5Q96QE3 1844 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 POLA1P09884 1462 aaPredicted RBP2.26□□□□□ -2.05
VPS50-209ENST00000467326 TEX14Q8IWB6 1497 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 GTF3C1Q12789 2109 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 DAPK1P53355 1430 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 IGKV1D-37A0A075B6S9 117 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 TRAV7A0A075B6U4 112 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 TRGV5A0A0B4J1U4 118 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 TRBV10-2A0A0K0K1G8 114 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 CCDC179H3BU77 68 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 APOC4-APOC2K7ER74 178 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 MPC2O95563 127 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 APOC2P02655 101 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 CTSDP07339 412 aaPredicted RBP2.25□□□□□ -2.05
VPS50-209ENST00000467326 DEFA5Q01523 94 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 ZNF90Q03938 601 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 CATR1Q13166 79 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 Q56UQ5 140 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 PATE2Q6UY27 113 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 Q6ZS52 159 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 ST20-AS1Q8NBB2 130 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 OR5AK2Q8NH90 309 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 CHCHD1Q96BP2 118 aaKnown RBP2.25□□□□□ -2.05
VPS50-209ENST00000467326 PRO1933Q9H354 126 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 TAS2R4Q9NYW5 299 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 DNAJC15Q9Y5T4 150 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 KDM5DQ9BY66 1539 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 TET2Q6N021 2002 aaPredicted RBP2.25□□□□□ -2.05
VPS50-209ENST00000467326 DOCK6Q96HP0 2047 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 CDC42BPBQ9Y5S2 1711 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 RGS12O14924 1447 aa2.25□□□□□ -2.05
VPS50-209ENST00000467326 RIMBP3CA6NJZ7 1639 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 RIMBP3BA6NNM3 1639 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 RIMBP3Q9UFD9 1639 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 SCN2AQ99250 2005 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 MDFIC2A0A1B0GVS7 189 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 C17orf98A8MV24 154 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 ZNF736B4DX44 427 aaPredicted RBP2.24□□□□□ -2.05
VPS50-209ENST00000467326 C17orf112F2Z3M2 114 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 H7C2G1 150 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 K7EM74 188 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 GEMIN2O14893 280 aaKnown RBP2.24□□□□□ -2.05
VPS50-209ENST00000467326 HYPMO75409 117 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 KLF7O75840 302 aaPredicted RBP2.24□□□□□ -2.05
VPS50-209ENST00000467326 COL8A2P25067 703 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 CKS2P33552 79 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 SNCAP37840 140 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 FOXA1P55317 472 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 LINC00315P59091 139 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 BLCAPP62952 87 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 CIRBPQ14011 172 aaKnown RBP2.24□□□□□ -2.05
VPS50-209ENST00000467326 SLC35E3Q7Z769 313 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 OR5AS1Q8N127 324 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 OR4X2Q8NGF9 303 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 KLF14Q8TD94 323 aaPredicted RBP2.24□□□□□ -2.05
VPS50-209ENST00000467326 AQP3Q92482 292 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 PKMYT1Q99640 499 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 C16orf95Q9H693 158 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 FAM215AQ9Y5M1 114 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 CHCHD2Q9Y6H1 151 aaPredicted RBP2.24□□□□□ -2.05
VPS50-209ENST00000467326 LY96Q9Y6Y9 160 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 SMARCA4P51532 1647 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 TRPM1Q7Z4N2 1603 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 ECM29Q5VYK3 1845 aa2.24□□□□□ -2.05
VPS50-209ENST00000467326 DSCAML1Q8TD84 2053 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 COL1A1P02452 1464 aaPredicted RBP2.23□□□□□ -2.05
VPS50-209ENST00000467326 CFTRP13569 1480 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 PIGBOS1A0A0B4J2F0 54 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 C7orf66A4D0T2 115 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 FAM24AA6NFZ4 105 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 F8W1H4 67 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 RPL36A-HNRNPH2H7BZ11 118 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 M0R129 80 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 CPSF4O95639 269 aaKnown RBP2.23□□□□□ -2.05
VPS50-209ENST00000467326 TRACP01848 142 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 GYPAP02724 150 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 SLC25A4P12235 298 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 ESRGQ1W209 222 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 ASB16-AS1Q495Z4 193 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 FAM229BQ4G0N7 80 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 C9orf153Q5TBE3 101 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 OR2T2Q6IF00 324 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 Q6ZUT4 128 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 C3orf56Q8N813 242 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 LINC00052Q96N35 136 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 RETNLBQ9BQ08 111 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 AGPAT4-IT1Q9H0P7 198 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 CYTL1Q9NRR1 136 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 UQCR10Q9UDW1 63 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 RABAC1Q9UI14 185 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms