RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 PRNDQ9UKY0 176 aa3.12□□□□□ -1.91
COPS3-204ENST00000462236 GOLT1BQ9Y3E0 138 aa3.12□□□□□ -1.91
COPS3-204ENST00000462236 A0A075B6Q4 140 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 A0A0J9YX75 114 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 LRCOL1A6NCL2 159 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 TMEM235A6NFC5 223 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 H3BMQ9 156 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 MYL12BO14950 172 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 IGKV1-39P01597 117 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 IGKV1D-39P04432 117 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 IGLC1P0CG04 106 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 RNASE2P10153 161 aaKnown RBP3.11□□□□□ -1.91
COPS3-204ENST00000462236 PTHLHP12272 177 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 ELK1P19419 428 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 AZU1P20160 251 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 G6PCP35575 357 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 TALDO1P37837 337 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 RPL5P46777 297 aaKnown RBP3.11□□□□□ -1.91
COPS3-204ENST00000462236 EIF2B2P49770 351 aaKnown RBP3.11□□□□□ -1.91
COPS3-204ENST00000462236 PPT1P50897 306 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 RORCP51449 518 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 PSG9Q00887 426 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 CLINT1Q14677 625 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 BSXQ3C1V8 233 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 CDNFQ49AH0 187 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 HES5Q5TA89 166 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 LINC01561Q8N1V8 128 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 OR51H1Q8NH63 302 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 LGALS14Q8TCE9 139 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 CYGBQ8WWM9 190 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 IGF2BP2-AS1Q96M15 143 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 TSC22D3Q99576 134 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 HINT2Q9BX68 163 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 ANAPC11Q9NYG5 84 aa3.11□□□□□ -1.91
COPS3-204ENST00000462236 TRAV1-2A0A0B4J238 106 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 METTL21EPA6NDL7 271 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 IFITM5A6NNB3 132 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 ZNF705GA8MUZ8 300 aaPredicted RBP3.1□□□□□ -1.91
COPS3-204ENST00000462236 ZNF701M0R085 212 aaPredicted RBP3.1□□□□□ -1.91
COPS3-204ENST00000462236 SIVA1O15304 175 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 ATP8B1O43520 1251 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 PGLYRP1O75594 196 aaPredicted RBP3.1□□□□□ -1.91
COPS3-204ENST00000462236 ARL6IP5O75915 188 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 SNAPC5O75971 98 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 KRASP01116 189 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 DEFB130BP0DP73 79 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 DEFB130AP0DP74 79 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 LPAR6P43657 344 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 PSMB3P49720 205 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 OR10A3P58181 314 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 ARPC4P59998 168 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 YPEL3P61236 119 aaPredicted RBP3.1□□□□□ -1.91
COPS3-204ENST00000462236 HSPE1P61604 102 aaKnown RBP3.1□□□□□ -1.91
COPS3-204ENST00000462236 B2MP61769 119 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 RPS25P62851 125 aaKnown RBP3.1□□□□□ -1.91
COPS3-204ENST00000462236 FAM78BQ5VT40 261 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 AADACL3Q5VUY0 350 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 ZFP1Q6P2D0 407 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 AHSA2Q719I0 299 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 TPRA1Q86W33 373 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 CEND1Q8N111 149 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 MTURNQ8N3F0 131 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 RPH3ALQ9UNE2 315 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
COPS3-204ENST00000462236 TRAV30A0A087WSZ9 112 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 TRAV26-1A0A087WT03 109 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 A0A096LPF7 62 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 F6UB75 175 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 CORTO00230 105 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 M6PRP20645 277 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 CALRP27797 417 aaKnown RBP3.09□□□□□ -1.91
COPS3-204ENST00000462236 ERHP84090 104 aaKnown RBP3.09□□□□□ -1.91
COPS3-204ENST00000462236 FABP5Q01469 135 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 TRAM1Q15629 374 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 ZNF555Q8NEP9 628 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 OR11H7Q8NGC8 314 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 OR4B1Q8NGF8 309 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 OR4C16Q8NGL9 310 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 OR1S2Q8NGQ3 325 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 TMEM203Q969S6 136 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 GNPNAT1Q96EK6 184 aaPredicted RBP3.09□□□□□ -1.91
COPS3-204ENST00000462236 NARS2Q96I59 477 aaKnown RBP3.09□□□□□ -1.91
COPS3-204ENST00000462236 C7orf50Q9BRJ6 194 aaKnown RBP3.09□□□□□ -1.91
COPS3-204ENST00000462236 MND1Q9BWT6 205 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 ANAPC10Q9UM13 185 aa3.09□□□□□ -1.91
COPS3-204ENST00000462236 LPAP08519 4548 aa3.09□□□□□ -1.92
COPS3-204ENST00000462236 K7EP13 123 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 ISLRO14498 428 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 GSTZ1O43708 216 aaPredicted RBP3.08□□□□□ -1.92
COPS3-204ENST00000462236 GNAO1P09471 354 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 HSMCR30P0CW71 290 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 PSMA1P25786 263 aaKnown RBP3.08□□□□□ -1.92
COPS3-204ENST00000462236 PSMB9P28065 219 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 FXYD4P59646 89 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 PRSS54Q6PEW0 395 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 UFD1Q92890 307 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 BORCS5Q969J3 196 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 TMEM230Q96A57 120 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 GPR146Q96CH1 333 aa3.08□□□□□ -1.92
COPS3-204ENST00000462236 FXYD6Q9H0Q3 95 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms