RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 K7ERJ3 54 aa15.81■□□□□ 0.12
SNX27-204ENST00000458013 ZNF561-AS1K7EIQ3 104 aa15.81■□□□□ 0.12
SNX27-204ENST00000458013 DOCK6Q96HP0 2047 aa15.81■□□□□ 0.12
SNX27-204ENST00000458013 DIAPH2-AS1Q14236 149 aa15.81■□□□□ 0.12
SNX27-204ENST00000458013 LY6G5BQ8NDX9 201 aa15.81■□□□□ 0.12
SNX27-204ENST00000458013 UBE2V1Q13404 147 aa15.8■□□□□ 0.12
SNX27-204ENST00000458013 TRPT1Q86TN4 253 aaKnown RBP15.8■□□□□ 0.12
SNX27-204ENST00000458013 FER1L5A0AVI2 2057 aa15.8■□□□□ 0.12
SNX27-204ENST00000458013 TRAV1-1A0A0B4J248 108 aa15.8■□□□□ 0.12
SNX27-204ENST00000458013 IGKV1-6A0A0C4DH72 117 aa15.8■□□□□ 0.12
SNX27-204ENST00000458013 DAD1P61803 113 aa15.8■□□□□ 0.12
SNX27-204ENST00000458013 USMG5Q96IX5 58 aa15.8■□□□□ 0.12
SNX27-204ENST00000458013 HOXD3P31249 432 aaPredicted RBP15.8■□□□□ 0.12
SNX27-204ENST00000458013 LINC01619G3V211 115 aa15.79■□□□□ 0.12
SNX27-204ENST00000458013 ZNRF2Q8NHG8 242 aa15.79■□□□□ 0.12
SNX27-204ENST00000458013 PRB2P02812 416 aaPredicted RBP15.79■□□□□ 0.12
SNX27-204ENST00000458013 PTPRDP23468 1912 aa15.78■□□□□ 0.12
SNX27-204ENST00000458013 H3BMM0 161 aa15.78■□□□□ 0.12
SNX27-204ENST00000458013 UBE2WQ96B02 151 aa15.78■□□□□ 0.12
SNX27-204ENST00000458013 DEFB105AQ8NG35 78 aa15.78■□□□□ 0.12
SNX27-204ENST00000458013 RNF166Q96A37 237 aaPredicted RBP15.78■□□□□ 0.12
SNX27-204ENST00000458013 IGKV1-39P01597 117 aa15.77■□□□□ 0.12
SNX27-204ENST00000458013 IGKV1D-39P04432 117 aa15.77■□□□□ 0.12
SNX27-204ENST00000458013 THAP8Q8NA92 274 aa15.77■□□□□ 0.12
SNX27-204ENST00000458013 TMEM126AQ9H061 195 aa15.77■□□□□ 0.12
SNX27-204ENST00000458013 TMEM75Q8N9X5 138 aa15.77■□□□□ 0.12
SNX27-204ENST00000458013 DTX1Q86Y01 620 aa15.77■□□□□ 0.12
SNX27-204ENST00000458013 TINCRA0A1B0GVN0 87 aa15.77■□□□□ 0.11
SNX27-204ENST00000458013 FREM3P0C091 2139 aa15.77■□□□□ 0.11
SNX27-204ENST00000458013 MRPL51Q4U2R6 128 aaKnown RBP15.77■□□□□ 0.11
SNX27-204ENST00000458013 IGHV4-4A0A075B6R2 117 aa15.76■□□□□ 0.11
SNX27-204ENST00000458013 NKAPP1Q8N9T2 125 aa15.76■□□□□ 0.11
SNX27-204ENST00000458013 ZNF503-AS2A6NEH8 195 aa15.76■□□□□ 0.11
SNX27-204ENST00000458013 CMC4P56277 68 aaPredicted RBP15.76■□□□□ 0.11
SNX27-204ENST00000458013 IGLV2-23P01705 113 aa15.76■□□□□ 0.11
SNX27-204ENST00000458013 RBMY1FQ15415 496 aaKnown RBP15.76■□□□□ 0.11
SNX27-204ENST00000458013 C8orf86Q6ZUL3 223 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 CGB7P0DN87 165 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 IGHV1-24A0A0C4DH33 117 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 I3L3M4 83 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 MST1LQ2TV78 715 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 SLAQ13239 276 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 TRBV25-1A0A075B6N4 114 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 A0A0J9YY99 117 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 ZNF726P1Q15940 193 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 ARTNQ5T4W7 220 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 C9orf153Q5TBE3 101 aa15.75■□□□□ 0.11
SNX27-204ENST00000458013 MRPL27Q9P0M9 148 aaKnown RBP15.74■□□□□ 0.11
SNX27-204ENST00000458013 KIF26BQ2KJY2 2108 aa15.74■□□□□ 0.11
SNX27-204ENST00000458013 IGF2BP2-AS1Q96M15 143 aa15.74■□□□□ 0.11
SNX27-204ENST00000458013 HLA-DMBP28068 263 aa15.74■□□□□ 0.11
SNX27-204ENST00000458013 C2orf66Q6UXQ4 117 aa15.74■□□□□ 0.11
SNX27-204ENST00000458013 SCRT2Q9NQ03 307 aa15.74■□□□□ 0.11
SNX27-204ENST00000458013 MSMBP08118 114 aa15.74■□□□□ 0.11
SNX27-204ENST00000458013 HAMPP81172 84 aa15.74■□□□□ 0.11
SNX27-204ENST00000458013 C18orf32Q8TCD1 76 aa15.73■□□□□ 0.11
SNX27-204ENST00000458013 CEACAM8P31997 349 aaPredicted RBP15.73■□□□□ 0.11
SNX27-204ENST00000458013 PFN1P07737 140 aaKnown RBP15.73■□□□□ 0.11
SNX27-204ENST00000458013 RNF5Q99942 180 aa15.73■□□□□ 0.11
SNX27-204ENST00000458013 SRSF8Q9BRL6 282 aaKnown RBP15.73■□□□□ 0.11
SNX27-204ENST00000458013 TSSC4Q9Y5U2 329 aaPredicted RBP15.73■□□□□ 0.11
SNX27-204ENST00000458013 WDR86Q86TI4 376 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 C17orf77Q96MU5 243 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 C1QTNF4Q9BXJ3 329 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 LINC01549A6NIU2 74 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 CRIPAKQ8N1N5 446 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 NDUFS5O43920 106 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 HLA-DRB4P13762 266 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 C17orf58Q2M2W7 97 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 DNAJC30Q96LL9 226 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 HLA-DRB4X5D2U9 266 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 ESPL1Q14674 2120 aa15.72■□□□□ 0.11
SNX27-204ENST00000458013 LYPD1Q8N2G4 141 aa15.71■□□□□ 0.11
SNX27-204ENST00000458013 WDR90Q96KV7 1748 aa15.71■□□□□ 0.11
SNX27-204ENST00000458013 Q6ZQT7 251 aa15.71■□□□□ 0.11
SNX27-204ENST00000458013 TPRP12270 2363 aaKnown RBP15.71■□□□□ 0.11
SNX27-204ENST00000458013 PRSS46E5RG02 174 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 F6UB75 175 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 SOCS3O14543 225 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 TCTEX1D4Q5JR98 221 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 TRBV6-6A0A0A6YYG2 114 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 CRLF1O75462 422 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 FGF6P10767 208 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 PRSS29PA6NIE9 313 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 Q6ZR03 302 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 ZC2HC1AQ96GY0 325 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 KLF2Q9Y5W3 355 aaPredicted RBP15.7■□□□□ 0.1
SNX27-204ENST00000458013 OOSP1A8MZH6 123 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 CD5LO43866 347 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 LYL1P12980 280 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 Q6ZWC4 215 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 GFRA4Q9GZZ7 299 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 LY96Q9Y6Y9 160 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 LTBP1Q14766 1721 aa15.7■□□□□ 0.1
SNX27-204ENST00000458013 FHL1Q13642 323 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 Q8N8P6 123 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 RSPO3Q9BXY4 272 aaPredicted RBP15.69■□□□□ 0.1
SNX27-204ENST00000458013 IGHV1-69DA0A0B4J2H0 117 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 IGHV1-69P01742 117 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 MMP23AO75900 390 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms