RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 IGHG4P01861 327 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 KRTDAPP60985 99 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 SAPCD1Q5SSQ6 148 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 CLEC19AQ6UXS0 136 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 HSBP1O75506 76 aa12.91□□□□□ -0.34
CCDC43-202ENST00000457422 FAM19A2Q8N3H0 131 aa12.91□□□□□ -0.34
CCDC43-202ENST00000457422 C20orf144Q9BQM9 153 aa12.91□□□□□ -0.34
CCDC43-202ENST00000457422 NDFIP1Q9BT67 221 aa12.91□□□□□ -0.34
CCDC43-202ENST00000457422 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
CCDC43-202ENST00000457422 CLPSL1A2RUU4 121 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 IGHV4-38-2P0DP08 117 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 RIGQ13278 110 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 IGFL4Q6B9Z1 124 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 PRR25Q96S07 402 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 FLNCQ14315 2725 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 TRAV41A0A0B4J266 112 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 HLA-DMBP28068 263 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 LBHQ53QV2 105 aaPredicted RBP12.9□□□□□ -0.34
CCDC43-202ENST00000457422 URB1-AS1Q96HZ7 61 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 SPOCK3Q9BQ16 436 aa12.9□□□□□ -0.34
CCDC43-202ENST00000457422 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 ARMS2P0C7Q2 107 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 NTF3P20783 257 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 TDRG1Q3Y452 100 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 FAM223AQ8IWN6 122 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 BORCS7Q96B45 105 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 USP9XQ93008 2570 aaPredicted RBP12.89□□□□□ -0.35
CCDC43-202ENST00000457422 ACACBO00763 2458 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 RELQ04864 619 aaPredicted RBP12.89□□□□□ -0.35
CCDC43-202ENST00000457422 ATP5G2Q06055 141 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 VAMP8Q9BV40 100 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 LINC00527Q9UJ94 153 aa12.89□□□□□ -0.35
CCDC43-202ENST00000457422 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.88□□□□□ -0.35
CCDC43-202ENST00000457422 SH2D1AO60880 128 aa12.88□□□□□ -0.35
CCDC43-202ENST00000457422 RNASEKQ6P5S7 137 aaKnown RBP12.88□□□□□ -0.35
CCDC43-202ENST00000457422 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
CCDC43-202ENST00000457422 IGF1P05019 195 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 LCN12Q6JVE5 192 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 SLC50A1Q9BRV3 221 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 IGHV3-66A0A0C4DH42 116 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 TMEM189A5PLL7 270 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 M0R2Z0 102 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 BRI3O95415 125 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 MSMBP08118 114 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 Q8TAT8 98 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 VGLL1Q99990 258 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 U3KQE9 123 aa12.87□□□□□ -0.35
CCDC43-202ENST00000457422 RBAKDNA6NC62 111 aa12.86□□□□□ -0.35
CCDC43-202ENST00000457422 FAM181BA6NEQ2 426 aa12.86□□□□□ -0.35
CCDC43-202ENST00000457422 LY6EQ16553 131 aa12.86□□□□□ -0.35
CCDC43-202ENST00000457422 CYB5R2Q6BCY4 276 aa12.86□□□□□ -0.35
CCDC43-202ENST00000457422 ZNF493Q6ZR52 646 aa12.86□□□□□ -0.35
CCDC43-202ENST00000457422 METTL26Q96S19 204 aa12.86□□□□□ -0.35
CCDC43-202ENST00000457422 C2orf88Q9BSF0 95 aa12.86□□□□□ -0.35
CCDC43-202ENST00000457422 ZFHX3Q15911 3703 aa12.86□□□□□ -0.35
CCDC43-202ENST00000457422 RAB4AP20338 218 aa12.85□□□□□ -0.35
CCDC43-202ENST00000457422 BMI1P35226 326 aa12.85□□□□□ -0.35
CCDC43-202ENST00000457422 SRSF2Q01130 221 aaKnown RBP12.85□□□□□ -0.35
CCDC43-202ENST00000457422 PAM16Q9Y3D7 125 aa12.85□□□□□ -0.35
CCDC43-202ENST00000457422 IGHV3OR16-13A0A075B7E8 117 aa12.85□□□□□ -0.35
CCDC43-202ENST00000457422 IGHV3-74A0A0B4J1X5 117 aa12.85□□□□□ -0.35
CCDC43-202ENST00000457422 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
CCDC43-202ENST00000457422 RPS20P60866 119 aaKnown RBP12.85□□□□□ -0.35
CCDC43-202ENST00000457422 NRGNQ92686 78 aa12.85□□□□□ -0.35
CCDC43-202ENST00000457422 TPPP3Q9BW30 176 aa12.85□□□□□ -0.35
CCDC43-202ENST00000457422 TMSB15BA0A087X1C1 80 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 A6NDX4 124 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 H3BUA1 57 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 M0QZ24 198 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 IGHG2P01859 326 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 SPG11Q96JI7 2443 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 CELSR1Q9NYQ6 3014 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 IGHV3-49A0A0A0MS15 119 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 C2orf70A6NJV1 201 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 H3BUX3 64 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 M0QZK8 103 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 TRGV3P03979 118 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 CTRLP40313 264 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 DSCR9P59020 149 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 EBLN2Q6P2I7 272 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
CCDC43-202ENST00000457422 MIEN1Q9BRT3 115 aa12.84□□□□□ -0.35
CCDC43-202ENST00000457422 PRAC2D3DTV9 90 aa12.83□□□□□ -0.36
CCDC43-202ENST00000457422 ZNF80P51504 273 aaPredicted RBP12.83□□□□□ -0.36
CCDC43-202ENST00000457422 LYZL1Q6UWQ5 148 aa12.83□□□□□ -0.36
CCDC43-202ENST00000457422 RNF182Q8N6D2 247 aa12.83□□□□□ -0.36
CCDC43-202ENST00000457422 B4DSR2 109 aa12.82□□□□□ -0.36
CCDC43-202ENST00000457422 PRB1P04280 392 aa12.82□□□□□ -0.36
CCDC43-202ENST00000457422 LINC00614P0C842 121 aa12.82□□□□□ -0.36
CCDC43-202ENST00000457422 BTF3P20290 206 aaKnown RBP12.82□□□□□ -0.36
CCDC43-202ENST00000457422 PPIFP30405 207 aaKnown RBP12.82□□□□□ -0.36
CCDC43-202ENST00000457422 MRPL52Q86TS9 123 aaKnown RBP12.82□□□□□ -0.36
CCDC43-202ENST00000457422 ERCC8Q13216 396 aa12.82□□□□□ -0.36
CCDC43-202ENST00000457422 PMCHL1Q16048 86 aa12.82□□□□□ -0.36
CCDC43-202ENST00000457422 HIF1ANQ9NWT6 349 aa12.82□□□□□ -0.36
CCDC43-202ENST00000457422 IGHV1-24A0A0C4DH33 117 aa12.81□□□□□ -0.36
CCDC43-202ENST00000457422 GATA3P23771 443 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms