RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 A0A096LPE4 126 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 A0A1W2PPZ6 126 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 FAM90A27PA6NNH2 459 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 E9PLN8 166 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 NTN3O00634 580 aaPredicted RBP1.77□□□□□ -2.13
USP53-202ENST00000450251 ARMS2P0C7Q2 107 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 MED14OSP0DP75 135 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 SUMO2P61956 95 aaKnown RBP1.77□□□□□ -2.13
USP53-202ENST00000450251 RPL11P62913 178 aaKnown RBP1.77□□□□□ -2.13
USP53-202ENST00000450251 SIGLEC15Q6ZMC9 328 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 TRPT1Q86TN4 253 aaKnown RBP1.77□□□□□ -2.13
USP53-202ENST00000450251 PCP2Q8IVA1 136 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 SHISA5Q8N114 240 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 TMEM167AQ8TBQ9 72 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 KLK15Q9H2R5 256 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 TMEM14BQ9NUH8 114 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 MRPL35Q9NZE8 188 aaKnown RBP1.77□□□□□ -2.13
USP53-202ENST00000450251 U3KQK5 164 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 MAST4O15021 2626 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 WIPF3A6NGB9 483 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 SHISA8B8ZZ34 492 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 C4orf51C9J302 202 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 TCL1BO95988 128 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 IGHV1-69P01742 117 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 IGKV3-11P04433 115 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 CRYGAP11844 174 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 C1orf61Q13536 156 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 C6orf226Q5I0X4 101 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 IL17RELQ6ZVW7 336 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 CNEP1R1Q8N9A8 125 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 TOMM6Q96B49 74 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 SHANK2-AS3Q9BTD1 123 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 AGPAT4-IT1Q9H0P7 198 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 ORMDL1Q9P0S3 153 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 TP53TG3Q9ULZ0 132 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 U3KQE9 123 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 TRAV12-3A0A0B4J271 114 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 J3QL48 77 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 WFDC3Q8IUB2 231 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 RFESDQ8TAC1 157 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 CYYR1Q96J86 154 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 JPT2Q9H910 190 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 DKK2Q9UBU2 259 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 LSM4Q9Y4Z0 139 aaKnown RBP1.77□□□□□ -2.13
USP53-202ENST00000450251 CKAP5Q14008 2032 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 ATRXP46100 2492 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 FASNP49327 2511 aaKnown RBP1.77□□□□□ -2.13
USP53-202ENST00000450251 BAALC-AS2P0C853 105 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 SAA1P0DJI8 122 aaPredicted RBP1.77□□□□□ -2.13
USP53-202ENST00000450251 UBE2AP49459 152 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 DEFB133Q30KQ1 61 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 C2orf66Q6UXQ4 117 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 PRIMA1Q86XR5 153 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 LYPD6Q86Y78 171 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 SLC25A45Q8N413 288 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 LINC00477Q96M19 166 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 CCDC88CQ9P219 2028 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 CHD6Q8TD26 2715 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 CEP250Q9BV73 2442 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 OTOGLQ3ZCN5 2332 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 PTPRDP23468 1912 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 OBSL1O75147 1896 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 A0A0G2JRQ6 117 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 SPTY2D1-AS1A0A0U1RR47 76 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 INS-IGF2F8WCM5 200 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 FOXS1O43638 330 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 CD59P13987 128 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 CCL14Q16627 93 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 C9orf139Q6ZV77 190 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 SLC25A29Q8N8R3 303 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 BAALCQ8WXS3 180 aa1.77□□□□□ -2.13
USP53-202ENST00000450251 COL4A1P02462 1669 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 IGKV3D-11A0A0A0MRZ8 115 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 M0R1B8 84 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 SAA2P0DJI9 122 aaPredicted RBP1.76□□□□□ -2.13
USP53-202ENST00000450251 RNASE2P10153 161 aaKnown RBP1.76□□□□□ -2.13
USP53-202ENST00000450251 KIR2DL5BQ8NHK3 375 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 FXYD5Q96DB9 178 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 TIMM17AQ99595 171 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 TMEM133Q9H2Q1 129 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 FAM60AQ9NP50 221 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 HCSTQ9UBK5 93 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 PKIGQ9Y2B9 76 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 LENEPQ9Y5L5 61 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 PLXNB3Q9ULL4 1909 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 PTPN13Q12923 2485 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.76□□□□□ -2.13
USP53-202ENST00000450251 H3BRN7 92 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 CRLF1O75462 422 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 IGHG3P01860 377 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 NPPCP23582 126 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 CFHR2P36980 270 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 ZNF138P52744 262 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.76□□□□□ -2.13
USP53-202ENST00000450251 GUSBP11Q6P575 273 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 RNF186Q9NXI6 227 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 CCL26Q9Y258 94 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 COL4A4P53420 1690 aaPredicted RBP1.76□□□□□ -2.13
USP53-202ENST00000450251 A0A0J9YX75 114 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 C19orf71A6NCJ1 209 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms