RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 IGKV2D-40P01614 121 aaPredicted RBP13.44□□□□□ -0.26
SMC6-206ENST00000446852 ARL3P36405 182 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 RAB9AP51151 201 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 TMEM95Q3KNT9 176 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 KRTAP1-3Q8IUG1 177 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 GBGT1Q8N5D6 347 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 DAZAP1Q96EP5 407 aaKnown RBP13.44□□□□□ -0.26
SMC6-206ENST00000446852 TP53TG3Q9ULZ0 132 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 A0A087X0K7 114 aa13.43□□□□□ -0.26
SMC6-206ENST00000446852 CSN1S1P47710 185 aa13.43□□□□□ -0.26
SMC6-206ENST00000446852 COX19Q49B96 90 aa13.43□□□□□ -0.26
SMC6-206ENST00000446852 WIPF2Q8TF74 440 aaPredicted RBP13.43□□□□□ -0.26
SMC6-206ENST00000446852 METTL26Q96S19 204 aa13.43□□□□□ -0.26
SMC6-206ENST00000446852 CHEK1O14757 476 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 NUPR1O60356 82 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 IGLV1-40P01703 118 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 PF4V1P10720 104 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 CFHR3Q02985 330 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 GDF5OSQ5U4N7 250 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 Q96MF0 132 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 U3KQE9 123 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 ZNF705FA8MVS1 300 aaPredicted RBP13.42□□□□□ -0.26
SMC6-206ENST00000446852 A8MWL6 223 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 IGHV3-11P01762 117 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 KIAA1644Q3SXP7 199 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 CDPF1Q6NVV7 123 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 C16orf54Q6UWD8 224 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 C8orf49Q96NF6 230 aa13.42□□□□□ -0.26
SMC6-206ENST00000446852 HELZ2Q9BYK8 2649 aaKnown RBP13.42□□□□□ -0.26
SMC6-206ENST00000446852 HLA-DQA1P01909 254 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 CRISP2P16562 243 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 CRIP1P50238 77 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 USMG5Q96IX5 58 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 SERTM2A0A1B0GWG4 89 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 GZMBP10144 247 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 LINC00310P59036 64 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 C1orf194Q5T5A4 169 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 RASL11AQ6T310 242 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 UNQ9165/PRO28630Q6UXU0 137 aa13.41□□□□□ -0.26
SMC6-206ENST00000446852 F2Z2F3 143 aa13.4□□□□□ -0.26
SMC6-206ENST00000446852 SLAQ13239 276 aa13.4□□□□□ -0.26
SMC6-206ENST00000446852 HIST2H2BCQ6DN03 193 aa13.4□□□□□ -0.26
SMC6-206ENST00000446852 ARL6IP6Q8N6S5 226 aa13.4□□□□□ -0.26
SMC6-206ENST00000446852 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.4□□□□□ -0.26
SMC6-206ENST00000446852 A0A1B0GXF2 115 aa13.4□□□□□ -0.26
SMC6-206ENST00000446852 RNF182Q8N6D2 247 aa13.4□□□□□ -0.26
SMC6-206ENST00000446852 OR2D3Q8NGH3 330 aa13.4□□□□□ -0.26
SMC6-206ENST00000446852 VGLL1Q99990 258 aa13.4□□□□□ -0.26
SMC6-206ENST00000446852 TLN2Q9Y4G6 2542 aa13.4□□□□□ -0.26
SMC6-206ENST00000446852 OR4B1Q8NGF8 309 aa13.39□□□□□ -0.27
SMC6-206ENST00000446852 GFRA4Q9GZZ7 299 aa13.39□□□□□ -0.27
SMC6-206ENST00000446852 LCN12Q6JVE5 192 aa13.39□□□□□ -0.27
SMC6-206ENST00000446852 PGLYRP4Q96LB8 373 aa13.39□□□□□ -0.27
SMC6-206ENST00000446852 CAMPP49913 170 aa13.38□□□□□ -0.27
SMC6-206ENST00000446852 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
SMC6-206ENST00000446852 ATP5L2Q7Z4Y8 100 aa13.38□□□□□ -0.27
SMC6-206ENST00000446852 OR4X2Q8NGF9 303 aa13.38□□□□□ -0.27
SMC6-206ENST00000446852 Q8TAT8 98 aa13.38□□□□□ -0.27
SMC6-206ENST00000446852 ZNF580Q9UK33 172 aa13.38□□□□□ -0.27
SMC6-206ENST00000446852 PRAC2D3DTV9 90 aa13.38□□□□□ -0.27
SMC6-206ENST00000446852 APCSP02743 223 aa13.38□□□□□ -0.27
SMC6-206ENST00000446852 OR5R1Q8NH85 324 aa13.38□□□□□ -0.27
SMC6-206ENST00000446852 NDUFA4O00483 81 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 Q0VG73 95 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 RBPMS2Q6ZRY4 209 aaKnown RBP13.37□□□□□ -0.27
SMC6-206ENST00000446852 TMEM18Q96B42 140 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 PRR25Q96S07 402 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 SSBP4Q9BWG4 385 aaPredicted RBP13.37□□□□□ -0.27
SMC6-206ENST00000446852 TRAV8-2A0A0B4J237 113 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 FAM231BA6NCW3 169 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 SERF1AO75920 110 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 PLA2G2AP14555 144 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 SRIP30626 198 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 PRR31Q5SQ13 230 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 SLC50A1Q9BRV3 221 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 VPREB3Q9UKI3 123 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 CCDC168Q8NDH2 2452 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 PDZD2O15018 2839 aa13.37□□□□□ -0.27
SMC6-206ENST00000446852 FLNAP21333 2647 aaKnown RBP13.36□□□□□ -0.27
SMC6-206ENST00000446852 C10orf99Q6UWK7 81 aa13.36□□□□□ -0.27
SMC6-206ENST00000446852 Q6YL49 198 aa13.36□□□□□ -0.27
SMC6-206ENST00000446852 C8orf86Q6ZUL3 223 aa13.36□□□□□ -0.27
SMC6-206ENST00000446852 GLMPQ8WWB7 406 aa13.36□□□□□ -0.27
SMC6-206ENST00000446852 SMAD7O15105 426 aaKnown RBP13.36□□□□□ -0.27
SMC6-206ENST00000446852 CT45A10P0DMU9 189 aa13.36□□□□□ -0.27
SMC6-206ENST00000446852 HBBP68871 147 aa13.36□□□□□ -0.27
SMC6-206ENST00000446852 COX8CQ7Z4L0 72 aa13.36□□□□□ -0.27
SMC6-206ENST00000446852 A0A0G2JLM5 398 aa13.35□□□□□ -0.27
SMC6-206ENST00000446852 PRSS57Q6UWY2 283 aa13.35□□□□□ -0.27
SMC6-206ENST00000446852 BAGE3Q86Y29 109 aa13.35□□□□□ -0.27
SMC6-206ENST00000446852 PSMB8P28062 276 aa13.35□□□□□ -0.27
SMC6-206ENST00000446852 ERCC8Q13216 396 aa13.35□□□□□ -0.27
SMC6-206ENST00000446852 SAPCD1Q5SSQ6 148 aa13.35□□□□□ -0.27
SMC6-206ENST00000446852 GSN-AS1Q9NRJ2 163 aa13.35□□□□□ -0.27
SMC6-206ENST00000446852 ITPR2Q14571 2701 aa13.34□□□□□ -0.27
SMC6-206ENST00000446852 FBLL1A6NHQ2 334 aaKnown RBP13.34□□□□□ -0.27
SMC6-206ENST00000446852 ESDP10768 282 aa13.34□□□□□ -0.27
SMC6-206ENST00000446852 FOXA3P55318 350 aaPredicted RBP13.34□□□□□ -0.27
SMC6-206ENST00000446852 SH2D1AO60880 128 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms