RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 NPBQ8NG41 125 aa12.03□□□□□ -0.48
APP-208ENST00000439274 VKORC1Q9BQB6 163 aa12.03□□□□□ -0.48
APP-208ENST00000439274 TMEM189A5PLL7 270 aa12.03□□□□□ -0.48
APP-208ENST00000439274 OR11H6Q8NGC7 330 aa12.03□□□□□ -0.48
APP-208ENST00000439274 OR8A1Q8NGG7 326 aa12.03□□□□□ -0.48
APP-208ENST00000439274 OR10AG1Q8NH19 301 aa12.03□□□□□ -0.48
APP-208ENST00000439274 Q8TAT8 98 aa12.03□□□□□ -0.48
APP-208ENST00000439274 IGHV2-70DA0A0C4DH43 119 aa12.02□□□□□ -0.48
APP-208ENST00000439274 CBY3A6NI87 242 aa12.02□□□□□ -0.48
APP-208ENST00000439274 MFAP4P55083 255 aa12.02□□□□□ -0.48
APP-208ENST00000439274 DYNAPQ8N1N2 210 aa12.02□□□□□ -0.48
APP-208ENST00000439274 RAB1BQ9H0U4 201 aa12.02□□□□□ -0.48
APP-208ENST00000439274 SIGLEC8Q9NYZ4 499 aa12.02□□□□□ -0.48
APP-208ENST00000439274 OR2T8A6NH00 312 aa12.02□□□□□ -0.49
APP-208ENST00000439274 NCBP2LA6PVI3 153 aaKnown RBP12.02□□□□□ -0.49
APP-208ENST00000439274 HLA-DMBP28068 263 aa12.02□□□□□ -0.49
APP-208ENST00000439274 TCTAP57738 103 aa12.02□□□□□ -0.49
APP-208ENST00000439274 CDSNQ15517 529 aa12.02□□□□□ -0.49
APP-208ENST00000439274 SPTBN4Q9H254 2564 aa12.02□□□□□ -0.49
APP-208ENST00000439274 IGF2RP11717 2491 aa12.02□□□□□ -0.49
APP-208ENST00000439274 IGHV3-35A0A0C4DH35 117 aa12.01□□□□□ -0.49
APP-208ENST00000439274 A0A1B0GW15 77 aa12.01□□□□□ -0.49
APP-208ENST00000439274 SMKR1H3BMG3 65 aa12.01□□□□□ -0.49
APP-208ENST00000439274 CSN1S1P47710 185 aa12.01□□□□□ -0.49
APP-208ENST00000439274 Q6AWC8 147 aa12.01□□□□□ -0.49
APP-208ENST00000439274 ZNF493Q6ZR52 646 aa12.01□□□□□ -0.49
APP-208ENST00000439274 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
APP-208ENST00000439274 ARPC1AQ92747 370 aa12.01□□□□□ -0.49
APP-208ENST00000439274 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
APP-208ENST00000439274 PRELID3AQ96N28 172 aa12.01□□□□□ -0.49
APP-208ENST00000439274 MS4A6AQ9H2W1 248 aa12.01□□□□□ -0.49
APP-208ENST00000439274 C21orf62Q9NYP8 219 aa12.01□□□□□ -0.49
APP-208ENST00000439274 ZNF80P51504 273 aaPredicted RBP12□□□□□ -0.49
APP-208ENST00000439274 PDE6HQ13956 83 aa12□□□□□ -0.49
APP-208ENST00000439274 FAM104BQ5XKR9 115 aa12□□□□□ -0.49
APP-208ENST00000439274 TRAV30A0A087WSZ9 112 aa12□□□□□ -0.49
APP-208ENST00000439274 EGR2P11161 476 aaPredicted RBP12□□□□□ -0.49
APP-208ENST00000439274 CEACAM3P40198 252 aa12□□□□□ -0.49
APP-208ENST00000439274 C2orf91Q6ZV80 131 aa12□□□□□ -0.49
APP-208ENST00000439274 DEFB125Q8N687 156 aa12□□□□□ -0.49
APP-208ENST00000439274 VGLL1Q99990 258 aa12□□□□□ -0.49
APP-208ENST00000439274 MED13LQ71F56 2210 aa12□□□□□ -0.49
APP-208ENST00000439274 NPIPB5A8MRT5 1133 aa11.99□□□□□ -0.49
APP-208ENST00000439274 ODF3BA8MYP8 253 aa11.99□□□□□ -0.49
APP-208ENST00000439274 MRPL51Q4U2R6 128 aaKnown RBP11.99□□□□□ -0.49
APP-208ENST00000439274 C12orf54Q6X4T0 127 aa11.99□□□□□ -0.49
APP-208ENST00000439274 COX8AP10176 69 aa11.99□□□□□ -0.49
APP-208ENST00000439274 GPR183P32249 361 aa11.99□□□□□ -0.49
APP-208ENST00000439274 ANKRD39Q53RE8 183 aa11.99□□□□□ -0.49
APP-208ENST00000439274 PRR25Q96S07 402 aa11.99□□□□□ -0.49
APP-208ENST00000439274 SMAD5-AS1Q9Y6J3 95 aa11.99□□□□□ -0.49
APP-208ENST00000439274 WNK2Q9Y3S1 2297 aa11.98□□□□□ -0.49
APP-208ENST00000439274 HIST1H1AQ02539 215 aaPredicted RBP11.98□□□□□ -0.49
APP-208ENST00000439274 ZNF562Q6V9R5 426 aa11.98□□□□□ -0.49
APP-208ENST00000439274 ORMDL3Q8N138 153 aa11.98□□□□□ -0.49
APP-208ENST00000439274 U3KQK5 164 aa11.98□□□□□ -0.49
APP-208ENST00000439274 RBX1P62877 108 aa11.98□□□□□ -0.49
APP-208ENST00000439274 RHOGP84095 191 aa11.98□□□□□ -0.49
APP-208ENST00000439274 IGHG4P01861 327 aa11.97□□□□□ -0.49
APP-208ENST00000439274 PRTN3P24158 256 aa11.97□□□□□ -0.49
APP-208ENST00000439274 UCNP55089 124 aa11.97□□□□□ -0.49
APP-208ENST00000439274 PSG9Q00887 426 aa11.97□□□□□ -0.49
APP-208ENST00000439274 TWIST1Q15672 202 aa11.97□□□□□ -0.49
APP-208ENST00000439274 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
APP-208ENST00000439274 TMEM190Q8WZ59 177 aa11.97□□□□□ -0.49
APP-208ENST00000439274 NPYP01303 97 aa11.97□□□□□ -0.49
APP-208ENST00000439274 CTSGP08311 255 aa11.97□□□□□ -0.49
APP-208ENST00000439274 CACNG7P62955 275 aa11.97□□□□□ -0.49
APP-208ENST00000439274 AMMECR1LQ6DCA0 310 aa11.97□□□□□ -0.49
APP-208ENST00000439274 CACNA1BQ00975 2339 aa11.96□□□□□ -0.49
APP-208ENST00000439274 K7EP13 123 aa11.96□□□□□ -0.49
APP-208ENST00000439274 RPL7P18124 248 aaKnown RBP11.96□□□□□ -0.49
APP-208ENST00000439274 PCP4P48539 62 aa11.96□□□□□ -0.49
APP-208ENST00000439274 ZNF575Q86XF7 245 aa11.96□□□□□ -0.49
APP-208ENST00000439274 WFDC3Q8IUB2 231 aa11.96□□□□□ -0.49
APP-208ENST00000439274 TIMD4Q96H15 378 aa11.96□□□□□ -0.49
APP-208ENST00000439274 ZNF48Q96MX3 618 aaPredicted RBP11.96□□□□□ -0.49
APP-208ENST00000439274 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.49
APP-208ENST00000439274 VMO1Q7Z5L0 202 aa11.96□□□□□ -0.5
APP-208ENST00000439274 S100A7AQ86SG5 101 aa11.96□□□□□ -0.5
APP-208ENST00000439274 FER1L6-AS1Q8NA97 138 aa11.96□□□□□ -0.5
APP-208ENST00000439274 M0R1W7 72 aa11.95□□□□□ -0.5
APP-208ENST00000439274 CCL21O00585 134 aa11.95□□□□□ -0.5
APP-208ENST00000439274 FGF6P10767 208 aa11.95□□□□□ -0.5
APP-208ENST00000439274 CKS2P33552 79 aa11.95□□□□□ -0.5
APP-208ENST00000439274 SAPCD1Q5SSQ6 148 aa11.95□□□□□ -0.5
APP-208ENST00000439274 GAS8-AS1O95177 125 aa11.95□□□□□ -0.5
APP-208ENST00000439274 ERCC8Q13216 396 aa11.95□□□□□ -0.5
APP-208ENST00000439274 RABAC1Q9UI14 185 aa11.95□□□□□ -0.5
APP-208ENST00000439274 PAX8Q06710 450 aa11.94□□□□□ -0.5
APP-208ENST00000439274 ATRXP46100 2492 aa11.94□□□□□ -0.5
APP-208ENST00000439274 TRAV8-6A0A0B4J262 113 aa11.94□□□□□ -0.5
APP-208ENST00000439274 PRAC2D3DTV9 90 aa11.94□□□□□ -0.5
APP-208ENST00000439274 CD5LO43866 347 aa11.94□□□□□ -0.5
APP-208ENST00000439274 UQCRFS1P47985 274 aa11.94□□□□□ -0.5
APP-208ENST00000439274 Q8N6K4 173 aa11.94□□□□□ -0.5
APP-208ENST00000439274 IGHV7-81A0A0B4J1V7 117 aa11.93□□□□□ -0.5
APP-208ENST00000439274 IGHV3-66A0A0C4DH42 116 aa11.93□□□□□ -0.5
APP-208ENST00000439274 HBDP02042 147 aa11.93□□□□□ -0.5
APP-208ENST00000439274 ORM1P02763 201 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms