RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 LECT2O14960 151 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 HRASP01112 189 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGKV1D-33P01593 117 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGKV1-33P01594 117 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGHV3-7P01780 117 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 MT-ATP8P03928 68 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 TRAPPC2P0DI81 140 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 TRAPPC2BP0DI82 140 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 ETV6P41212 452 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZNF846Q147U1 533 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 EIF5AL1Q6IS14 154 aaKnown RBP2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGFL3Q6UXB1 125 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 SOSTDC1Q6X4U4 206 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZNF705AQ6ZN79 300 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 Q6ZS92 163 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 GABARAPL1Q9H0R8 117 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 ATG5Q9H1Y0 275 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 BCL2L10Q9HD36 194 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 RGPD1P0DJD0 1748 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 COL1A1P02452 1464 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 CD163L1Q9NR16 1453 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 NCKAP5O14513 1909 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 CHD4Q14839 1912 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 C3P01024 1663 aa2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 N4BP2Q86UW6 1770 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P12-201ENST00000438594 UBR1Q8IWV7 1749 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 MARF1Q9Y4F3 1742 aaKnown RBP2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 TET2Q6N021 2002 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 LOC107986453A0A1B0GWG9 222 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 C7orf66A4D0T2 115 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 A6NED7 52 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZFP92A6NM28 416 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 APOC4-APOC2K7ER74 178 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGHV1-46P01743 117 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 TRACP01848 142 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 HLA-DQA1P01909 254 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 APOC2P02655 101 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 TRGV3P03979 118 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 FXYD7P58549 80 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 AKR1C1Q04828 323 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 SYCNQ0VAF6 134 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 Q1RN00 199 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 C10orf91Q5T1B1 145 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZNF660Q6AZW8 331 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 NOXRED1Q6NXP6 359 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 SH2D6Q7Z4S9 175 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 C14orf178Q8N769 122 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 SIGLECL1Q8N7X8 197 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 Q8N976 141 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 OR5AK2Q8NH90 309 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 CLDND2Q8NHS1 167 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 COPS9Q8WXC6 57 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 C16orf74Q96GX8 76 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 MCEEQ96PE7 176 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 AQP10Q96PS8 301 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 PKMYT1Q99640 499 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 REG4Q9BYZ8 158 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 NPVFQ9HCQ7 196 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 SAR1AQ9NR31 198 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 BET1LQ9NYM9 111 aa2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 RPL26L1Q9UNX3 145 aaKnown RBP2.43□□□□□ -2.02
HMGB1P12-201ENST00000438594 SLIT1O75093 1534 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 TICRRQ7Z2Z1 1910 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 MAST2Q6P0Q8 1798 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 PIK3C2AO00443 1686 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGHV1-3A0A0C4DH29 117 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 C19orf71A6NCJ1 209 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 A6NDX4 124 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 M0R2P5 195 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 SLC25A20O43772 301 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 SH2D1AO60880 128 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGHV1-69P01742 117 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 RBP4P02753 201 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 IGHV4-34P06331 123 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 LINC00032P0C843 101 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 BLCAPP62952 87 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 CDK5R1Q15078 307 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 C2orf83Q53S99 150 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 Q5BKY6 102 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 MIC13Q5XKP0 118 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 FP248Q71RG6 208 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZNF720Q7Z2F6 126 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 CNEP1R1Q8N9A8 125 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 Q8N9W7 124 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 PFN4Q8NHR9 129 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 PSMF1Q92530 271 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 SCGB3A1Q96QR1 104 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 DSCAMO60469 2012 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 RAI1Q7Z5J4 1906 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 ATAD5Q96QE3 1844 aa2.42□□□□□ -2.02
HMGB1P12-201ENST00000438594 PIKFYVEQ9Y2I7 2098 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 NWD1Q149M9 1564 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 PSME4Q14997 1843 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 KIF20BQ96Q89 1820 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 MDFIC2A0A1B0GVS7 189 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 H3BQ15 152 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 ZNF737O75373 536 aa2.41□□□□□ -2.02
HMGB1P12-201ENST00000438594 LY6HO94772 140 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms