RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 IGHV3-35A0A0C4DH35 117 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 IGKV2D-40P01614 121 aaPredicted RBP10.76□□□□□ -0.69
HOXC4-202ENST00000430889 C1orf194Q5T5A4 169 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 REC114Q7Z4M0 266 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 SIGLECL1Q8N7X8 197 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 URB1-AS1Q96HZ7 61 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 NRN1Q9NPD7 142 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 HLA-DMBP28068 263 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 AMTP48728 403 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 DSCR9P59020 149 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 PRR25Q96S07 402 aa10.76□□□□□ -0.69
HOXC4-202ENST00000430889 SPTAN1Q13813 2472 aaKnown RBP10.75□□□□□ -0.69
HOXC4-202ENST00000430889 AVPP01185 164 aa10.75□□□□□ -0.69
HOXC4-202ENST00000430889 IGHG2P01859 326 aa10.75□□□□□ -0.69
HOXC4-202ENST00000430889 PPIFP30405 207 aaKnown RBP10.75□□□□□ -0.69
HOXC4-202ENST00000430889 DEFA6Q01524 100 aa10.75□□□□□ -0.69
HOXC4-202ENST00000430889 ATP5G2Q06055 141 aa10.75□□□□□ -0.69
HOXC4-202ENST00000430889 Q6AWC8 147 aa10.75□□□□□ -0.69
HOXC4-202ENST00000430889 BBC3Q96PG8 261 aaPredicted RBP10.75□□□□□ -0.69
HOXC4-202ENST00000430889 VGLL1Q99990 258 aa10.75□□□□□ -0.69
HOXC4-202ENST00000430889 CELSR1Q9NYQ6 3014 aa10.75□□□□□ -0.69
HOXC4-202ENST00000430889 LOC102724200A0A096LPH7 203 aaPredicted RBP10.74□□□□□ -0.69
HOXC4-202ENST00000430889 RELQ04864 619 aaPredicted RBP10.74□□□□□ -0.69
HOXC4-202ENST00000430889 SRSF1Q07955 248 aaKnown RBP eCLIP10.74□□□□□ -0.69
HOXC4-202ENST00000430889 SAPCD1Q5SSQ6 148 aa10.74□□□□□ -0.69
HOXC4-202ENST00000430889 ZNF575Q86XF7 245 aa10.74□□□□□ -0.69
HOXC4-202ENST00000430889 NDFIP1Q9BT67 221 aa10.74□□□□□ -0.69
HOXC4-202ENST00000430889 A0A1B0GUT8 65 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 B4DSR2 109 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 H3BUA1 57 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 SH2D1AO60880 128 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 ARMS2P0C7Q2 107 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 PMCHP20382 165 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 IGFL4Q6B9Z1 124 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 LCN12Q6JVE5 192 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 NRGNQ92686 78 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 NDUFAF3Q9BU61 184 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.73□□□□□ -0.69
HOXC4-202ENST00000430889 TRAV8-2A0A0B4J237 113 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 A0A1B0GW15 77 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 RBAKDNA6NC62 111 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 ZNF705FA8MVS1 300 aaPredicted RBP10.73□□□□□ -0.69
HOXC4-202ENST00000430889 H3BUX3 64 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 PRB1P04280 392 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 CT45A10P0DMU9 189 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 SRSF2Q01130 221 aaKnown RBP10.73□□□□□ -0.69
HOXC4-202ENST00000430889 PRR31Q5SQ13 230 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 FAM162BQ5T6X4 162 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
HOXC4-202ENST00000430889 CELSR2Q9HCU4 2923 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 FAM208BQ5VWN6 2430 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 PRAC2D3DTV9 90 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 M0QZK8 103 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 SLC25A16P16260 332 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 GATA3P23771 443 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 ZNF80P51504 273 aaPredicted RBP10.72□□□□□ -0.69
HOXC4-202ENST00000430889 RIGQ13278 110 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 DMRTA1Q5VZB9 504 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 FAM19A2Q8N3H0 131 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 Q8TAT8 98 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 MRPL53Q96EL3 112 aaKnown RBP10.72□□□□□ -0.69
HOXC4-202ENST00000430889 METTL26Q96S19 204 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 HIF1ANQ9NWT6 349 aa10.72□□□□□ -0.69
HOXC4-202ENST00000430889 TRGV3P03979 118 aa10.71□□□□□ -0.69
HOXC4-202ENST00000430889 C3orf79P0CE67 100 aa10.71□□□□□ -0.69
HOXC4-202ENST00000430889 ZNF705DP0CH99 300 aaPredicted RBP10.71□□□□□ -0.69
HOXC4-202ENST00000430889 ZNF705BP0CI00 300 aaPredicted RBP10.71□□□□□ -0.69
HOXC4-202ENST00000430889 CFHR3Q02985 330 aa10.71□□□□□ -0.69
HOXC4-202ENST00000430889 LY6EQ16553 131 aa10.71□□□□□ -0.69
HOXC4-202ENST00000430889 TDRG1Q3Y452 100 aa10.71□□□□□ -0.69
HOXC4-202ENST00000430889 GLMPQ8WWB7 406 aa10.71□□□□□ -0.69
HOXC4-202ENST00000430889 ZNF580Q9UK33 172 aa10.71□□□□□ -0.69
HOXC4-202ENST00000430889 CHD6Q8TD26 2715 aa10.71□□□□□ -0.7
HOXC4-202ENST00000430889 ZFYVE26Q68DK2 2539 aa10.7□□□□□ -0.7
HOXC4-202ENST00000430889 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.7□□□□□ -0.7
HOXC4-202ENST00000430889 CTRLP40313 264 aa10.7□□□□□ -0.7
HOXC4-202ENST00000430889 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 TMEM189A5PLL7 270 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 IGLV1-40P01703 118 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 TRBV12-3P01733 135 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 IGLC6P0CF74 106 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 KRTDAPP60985 99 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 Q6ZS46 218 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 ZNF843Q8N446 348 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 CHCHD1Q96BP2 118 aaKnown RBP10.69□□□□□ -0.7
HOXC4-202ENST00000430889 USMG5Q96IX5 58 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 FBN2P35556 2912 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 ARL3P36405 182 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 BLCAPP62952 87 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 ERCC8Q13216 396 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 C8orf86Q6ZUL3 223 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 RNF182Q8N6D2 247 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 SPG11Q96JI7 2443 aa10.69□□□□□ -0.7
HOXC4-202ENST00000430889 UBR5O95071 2799 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms