RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 TNFSF18Q9UNG2 199 aa1.35□□□□□ -2.19
PTPRC-207ENST00000418674 MICAL3Q7RTP6 2002 aa1.35□□□□□ -2.19
PTPRC-207ENST00000418674 USP54Q70EL1 1684 aa1.35□□□□□ -2.19
PTPRC-207ENST00000418674 MGAMO43451 1857 aa1.35□□□□□ -2.19
PTPRC-207ENST00000418674 PLXNA4Q9HCM2 1894 aa1.35□□□□□ -2.19
PTPRC-207ENST00000418674 PCNX2A6NKB5 2137 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 DISP2A7MBM2 1401 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 RTEL1-TNFRSF6BF6WH68 1400 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 IGKV2D-26A0A0A0MRZ7 120 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.34□□□□□ -2.19
PTPRC-207ENST00000418674 TRGV4A0A0C4DH28 118 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 B4DSR2 109 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 UQCRQO14949 82 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 IGLV1-51P01701 117 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 HBDP02042 147 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 CRPP02741 224 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 SLC25A5P05141 298 aaKnown RBP1.34□□□□□ -2.19
PTPRC-207ENST00000418674 ASAH2BP0C7U1 165 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 IGLC6P0CF74 106 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 ROMO1P60602 79 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 LSM3P62310 102 aaKnown RBP1.34□□□□□ -2.19
PTPRC-207ENST00000418674 RPS25P62851 125 aaKnown RBP1.34□□□□□ -2.19
PTPRC-207ENST00000418674 ZNF846Q147U1 533 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 ELOBQ15370 118 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 TPRXLQ17RH7 258 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 ZNF181Q2M3W8 571 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 CTAGE3PQ8IX95 158 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 Q8N814 137 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 C9orf163Q8N9P6 203 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 OR5D14Q8NGL3 314 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 TMEM254Q8TBM7 123 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 HYLS1Q96M11 299 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 CGREF1Q99674 301 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 TPRKBQ9Y3C4 175 aa1.34□□□□□ -2.19
PTPRC-207ENST00000418674 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.34□□□□□ -2.2
PTPRC-207ENST00000418674 MYH9P35579 1960 aaKnown RBP1.34□□□□□ -2.2
PTPRC-207ENST00000418674 POLEQ07864 2286 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 PRG4Q92954 1404 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-207ENST00000418674 CEP192Q8TEP8 1941 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 COL24A1Q17RW2 1714 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 LOC107986453A0A1B0GWG9 222 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 hDV103S1A0JD37 113 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 LINC00587B1AMM8 73 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 H3BRN7 92 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 ZNF737O75373 536 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 GPX1P07203 203 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 TSPAN19P0C672 248 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 LINC00694P0DN24 101 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 KDELR1P24390 212 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 COPZ1P61923 177 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 RRAS2P62070 204 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-207ENST00000418674 QRFPP83859 136 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 CDK6Q00534 326 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 DIAPH2-AS1Q14236 149 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 NEDD8Q15843 81 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 C1orf134Q5TEV5 83 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 HAGHLQ6PII5 290 aaPredicted RBP1.33□□□□□ -2.2
PTPRC-207ENST00000418674 LINC00311Q8N616 119 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 CLEC2BQ92478 149 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 ARL11Q969Q4 196 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 RAB37Q96AX2 223 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 MUCL1Q96DR8 90 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 OR4C12Q96R67 309 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 FKBP11Q9NYL4 201 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 STRCP1A6NGW2 1772 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 LAMB2P55268 1798 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 KIDINS220Q9ULH0 1771 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 KIF13AQ9H1H9 1805 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 TRPM7Q96QT4 1865 aa1.33□□□□□ -2.2
PTPRC-207ENST00000418674 COL4A5P29400 1685 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 KDM6AO15550 1401 aaPredicted RBP1.32□□□□□ -2.2
PTPRC-207ENST00000418674 RP1L1Q8IWN7 2480 aaPredicted RBP1.32□□□□□ -2.2
PTPRC-207ENST00000418674 PCDH15Q96QU1 1955 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 KIAA1549Q9HCM3 1950 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 COL1A1P02452 1464 aaPredicted RBP1.32□□□□□ -2.2
PTPRC-207ENST00000418674 TRAV12-1A0A0B4J245 112 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 ZNF727A8MUV8 499 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 DLEU1O43261 78 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 GNG7O60262 68 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 APOC1P02654 83 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 SAA1P0DJI8 122 aaPredicted RBP1.32□□□□□ -2.2
PTPRC-207ENST00000418674 HLA-DRB4P13762 266 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 HIST1H1BP16401 226 aaKnown RBP1.32□□□□□ -2.2
PTPRC-207ENST00000418674 AKR1D1P51857 326 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 SNRPD3P62318 126 aaKnown RBP1.32□□□□□ -2.2
PTPRC-207ENST00000418674 SELENOWP63302 87 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 CIRBPQ14011 172 aaKnown RBP1.32□□□□□ -2.2
PTPRC-207ENST00000418674 DEFB113Q30KQ7 82 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 OR4C6Q8NH72 309 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 CCL4L1Q8NHW4 92 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 SPACA4Q8TDM5 124 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 C2orf88Q9BSF0 95 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 LINC00470Q9BZP3 86 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 HLA-DRB4X5D2U9 266 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 RIMS1Q86UR5 1692 aaKnown RBP1.32□□□□□ -2.2
PTPRC-207ENST00000418674 IBTKQ9P2D0 1353 aaPredicted RBP1.32□□□□□ -2.2
PTPRC-207ENST00000418674 SCN3AQ9NY46 2000 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 TNS3Q68CZ2 1445 aa1.32□□□□□ -2.2
PTPRC-207ENST00000418674 HMCN1Q96RW7 5635 aa1.31□□□□□ -2.2
PTPRC-207ENST00000418674 PXDNLA1KZ92 1463 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms