RNA–Protein interactions for RNA: ENST00000405506.2

XRCC6-204, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 5 BASIC

Gene XRCC6, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-204ENST00000405506 CCDC144NLQ6NUI1 221 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 OR2D3Q8NGH3 330 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 RPH3ALQ9UNE2 315 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 PSG8Q9UQ74 426 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 MRPS16Q9Y3D3 137 aaKnown RBP8.13□□□□□ -1.11
XRCC6-204ENST00000405506 TRAV9-2A0A087WT02 112 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 HLA-DRB1P01911 266 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 MFAP4P55083 255 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 PRNTQ86SH4 94 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 C17orf77Q96MU5 243 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 DOPEY2Q9Y3R5 2298 aa8.13□□□□□ -1.11
XRCC6-204ENST00000405506 ZFHX3Q15911 3703 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 SH2D7A6NKC9 451 aaPredicted RBP8.12□□□□□ -1.11
XRCC6-204ENST00000405506 K7EQM0 130 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 AVPP01185 164 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 MSMBP08118 114 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 IGHV4-38-2P0DP08 117 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 CRIP1P50238 77 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 DSCR9P59020 149 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 NDPQ00604 133 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 BRD3OSQ6XYD6 125 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 MAPK1IP1LQ8NDC0 245 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 TXN2Q99757 166 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 PTPN13Q12923 2485 aa8.12□□□□□ -1.11
XRCC6-204ENST00000405506 TRAV40A0A0B4J280 105 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 IGHV1-69DA0A0B4J2H0 117 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 A0A1B0GUT8 65 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 FBLL1A6NHQ2 334 aaKnown RBP8.11□□□□□ -1.11
XRCC6-204ENST00000405506 J3QKU1 62 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 IGHV1-69P01742 117 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 LINC00614P0C842 121 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 TMEM11P17152 192 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 Q6AWC8 147 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 LCN12Q6JVE5 192 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 RNASEKQ6P5S7 137 aaKnown RBP8.11□□□□□ -1.11
XRCC6-204ENST00000405506 ZNF493Q6ZR52 646 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 TMEM70Q9BUB7 260 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 APCP25054 2843 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.11□□□□□ -1.11
XRCC6-204ENST00000405506 NCBP2LA6PVI3 153 aaKnown RBP8.11□□□□□ -1.11
XRCC6-204ENST00000405506 IL4P05112 153 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 SLC25A16P16260 332 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 RIGQ13278 110 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 COL5A1-AS1Q5SY13 56 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 Q71RC1 249 aaPredicted RBP8.11□□□□□ -1.11
XRCC6-204ENST00000405506 Q8N9W7 124 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 ARPC1AQ92747 370 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 ABCA12Q86UK0 2595 aa8.11□□□□□ -1.11
XRCC6-204ENST00000405506 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.1□□□□□ -1.114e-8■■■■□ 24.2
XRCC6-204ENST00000405506 DLEU1O43261 78 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 EGR2P11161 476 aaPredicted RBP8.1□□□□□ -1.11
XRCC6-204ENST00000405506 PSG9Q00887 426 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 ZNF124Q15973 351 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 KLF17Q5JT82 389 aaPredicted RBP8.1□□□□□ -1.11
XRCC6-204ENST00000405506 SPATA12Q7Z6I5 190 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 TMEM208Q9BTX3 173 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 HIF1ANQ9NWT6 349 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 NBPF19A0A087WUL8 3843 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 IGHV1-24A0A0C4DH33 117 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 B4DSR2 109 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 SYS1-DBNDD2H3BUS1 97 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 CHEK1O14757 476 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 GNG7O60262 68 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 ZNF25P17030 456 aaPredicted RBP8.1□□□□□ -1.11
XRCC6-204ENST00000405506 DEFB113Q30KQ7 82 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 BCL6BQ8N143 479 aaPredicted RBP8.1□□□□□ -1.11
XRCC6-204ENST00000405506 PIFOQ8TCI5 191 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 C21orf62Q9NYP8 219 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 THYN1Q9P016 225 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 LAMTOR2Q9Y2Q5 125 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 U3KQK5 164 aa8.1□□□□□ -1.11
XRCC6-204ENST00000405506 IGHV7-81A0A0B4J1V7 117 aa8.09□□□□□ -1.11
XRCC6-204ENST00000405506 NDUFB8O95169 186 aa8.09□□□□□ -1.11
XRCC6-204ENST00000405506 CTSGP08311 255 aa8.09□□□□□ -1.11
XRCC6-204ENST00000405506 IGLL1P15814 213 aa8.09□□□□□ -1.11
XRCC6-204ENST00000405506 TSPOP30536 169 aa8.09□□□□□ -1.11
XRCC6-204ENST00000405506 SRSF2Q01130 221 aaKnown RBP8.09□□□□□ -1.11
XRCC6-204ENST00000405506 PET117Q6UWS5 81 aa8.09□□□□□ -1.11
XRCC6-204ENST00000405506 KRTAP1-3Q8IUG1 177 aa8.09□□□□□ -1.11
XRCC6-204ENST00000405506 PSMG3-AS1Q96PY0 264 aa8.09□□□□□ -1.11
XRCC6-204ENST00000405506 RNF223E7ERA6 249 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 ARMS2P0C7Q2 107 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 FAM106CPP0CH98 169 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 RPL7P18124 248 aaKnown RBP8.08□□□□□ -1.12
XRCC6-204ENST00000405506 MAJINQ3KP22 176 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 Q56UQ5 140 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 Q6ZN92 141 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 AAMDCQ9H7C9 122 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 ST20Q9HBF5 79 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 BEX4Q9NWD9 120 aaPredicted RBP8.08□□□□□ -1.12
XRCC6-204ENST00000405506 ZANQ9Y493 2812 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 M0R3E3 92 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 LEPROTL1O95214 131 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 HNRNPA3P51991 378 aaKnown RBP8.08□□□□□ -1.12
XRCC6-204ENST00000405506 SAPCD1Q5SSQ6 148 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 TMEM219Q86XT9 240 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 CLEC5AQ9NY25 188 aa8.08□□□□□ -1.12
XRCC6-204ENST00000405506 LINC01548A6NM66 108 aa8.07□□□□□ -1.12
XRCC6-204ENST00000405506 IGHG4P01861 327 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms