RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 COL12A1Q99715 3063 aa13.13□□□□□ -0.31
DNMT3A-205ENST00000402667 BUB3O43684 328 aa13.13□□□□□ -0.31
DNMT3A-205ENST00000402667 GOSR1O95249 250 aa13.13□□□□□ -0.31
DNMT3A-205ENST00000402667 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-205ENST00000402667 RIGQ13278 110 aa13.13□□□□□ -0.31
DNMT3A-205ENST00000402667 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
DNMT3A-205ENST00000402667 COX8CQ7Z4L0 72 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 EEF1AKMT3Q96AZ1 226 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 PRR25Q96S07 402 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 MOB4Q9Y3A3 225 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 TRAV40A0A0B4J280 105 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 CLPSL1A2RUU4 121 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 FAM181BA6NEQ2 426 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 M0QZ24 198 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 FAM162BQ5T6X4 162 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 VGLL1Q99990 258 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 VPS13CQ709C8 3753 aa13.12□□□□□ -0.31
DNMT3A-205ENST00000402667 SH2D1AO60880 128 aa13.11□□□□□ -0.31
DNMT3A-205ENST00000402667 TRBV7-1A0A0A6YYK4 115 aa13.11□□□□□ -0.31
DNMT3A-205ENST00000402667 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-205ENST00000402667 RAB9AP51151 201 aa13.11□□□□□ -0.31
DNMT3A-205ENST00000402667 Q6AWC8 147 aa13.11□□□□□ -0.31
DNMT3A-205ENST00000402667 LCN12Q6JVE5 192 aa13.11□□□□□ -0.31
DNMT3A-205ENST00000402667 EBLN2Q6P2I7 272 aa13.11□□□□□ -0.31
DNMT3A-205ENST00000402667 MIEN1Q9BRT3 115 aa13.11□□□□□ -0.31
DNMT3A-205ENST00000402667 TPPP3Q9BW30 176 aa13.11□□□□□ -0.31
DNMT3A-205ENST00000402667 TMEM189A5PLL7 270 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 NDUFS8O00217 210 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 NUTF2P61970 127 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 ZNF705AQ6ZN79 300 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 GATD1Q8NB37 220 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 Q8TAT8 98 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 MEGF9Q9H1U4 602 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 SPG11Q96JI7 2443 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 ZFHX3Q15911 3703 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 A0A087X0K7 114 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 TMSB15BA0A087X1C1 80 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 TRAV41A0A0B4J266 112 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 IGHV3-66A0A0C4DH42 116 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 M0R143 59 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 ATP5J2P56134 94 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 CLEC2AQ6UVW9 174 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 LINC00527Q9UJ94 153 aa13.1□□□□□ -0.31
DNMT3A-205ENST00000402667 ACACBO00763 2458 aa13.09□□□□□ -0.31
DNMT3A-205ENST00000402667 A0A1B0GW15 77 aa13.09□□□□□ -0.31
DNMT3A-205ENST00000402667 TMEM8BA6NDV4 472 aa13.09□□□□□ -0.31
DNMT3A-205ENST00000402667 IGHV4-38-2P0DP08 117 aa13.09□□□□□ -0.31
DNMT3A-205ENST00000402667 ATP5G2Q06055 141 aa13.09□□□□□ -0.31
DNMT3A-205ENST00000402667 C19orf54Q5BKX5 351 aa13.09□□□□□ -0.31
DNMT3A-205ENST00000402667 IGHV4-30-2A0A087WSY4 118 aa13.08□□□□□ -0.31
DNMT3A-205ENST00000402667 C2orf70A6NJV1 201 aa13.08□□□□□ -0.31
DNMT3A-205ENST00000402667 LINC00614P0C842 121 aa13.08□□□□□ -0.31
DNMT3A-205ENST00000402667 RAB4AP20338 218 aa13.08□□□□□ -0.31
DNMT3A-205ENST00000402667 CTRLP40313 264 aa13.08□□□□□ -0.31
DNMT3A-205ENST00000402667 PMCHL1Q16048 86 aa13.08□□□□□ -0.31
DNMT3A-205ENST00000402667 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.08□□□□□ -0.31
DNMT3A-205ENST00000402667 IGHV3OR16-13A0A075B7E8 117 aa13.08□□□□□ -0.32
DNMT3A-205ENST00000402667 IGHV3-74A0A0B4J1X5 117 aa13.08□□□□□ -0.32
DNMT3A-205ENST00000402667 ZNF80P51504 273 aaPredicted RBP13.08□□□□□ -0.32
DNMT3A-205ENST00000402667 LYZL1Q6UWQ5 148 aa13.08□□□□□ -0.32
DNMT3A-205ENST00000402667 DOPEY1Q5JWR5 2465 aa13.08□□□□□ -0.32
DNMT3A-205ENST00000402667 IGSF10Q6WRI0 2623 aa13.08□□□□□ -0.32
DNMT3A-205ENST00000402667 BTF3P20290 206 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-205ENST00000402667 SPATA45Q537H7 98 aa13.07□□□□□ -0.32
DNMT3A-205ENST00000402667 PRAC2D3DTV9 90 aa13.07□□□□□ -0.32
DNMT3A-205ENST00000402667 CRIP2P52943 208 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-205ENST00000402667 CLEC5AQ9NY25 188 aa13.07□□□□□ -0.32
DNMT3A-205ENST00000402667 CELSR1Q9NYQ6 3014 aa13.07□□□□□ -0.32
DNMT3A-205ENST00000402667 IGHV1-24A0A0C4DH33 117 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 ZNF207O43670 478 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 ZNF138P52744 262 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 RNF182Q8N6D2 247 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 METTL26Q96S19 204 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 FLNCQ14315 2725 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 IGHV3-49A0A0A0MS15 119 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 TCAPO15273 167 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 BMI1P35226 326 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 ERCC8Q13216 396 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 ZNF493Q6ZR52 646 aa13.06□□□□□ -0.32
DNMT3A-205ENST00000402667 FAM223BA6NKX1 122 aa13.05□□□□□ -0.32
DNMT3A-205ENST00000402667 LY6EQ16553 131 aa13.05□□□□□ -0.32
DNMT3A-205ENST00000402667 FAM223AQ8IWN6 122 aa13.05□□□□□ -0.32
DNMT3A-205ENST00000402667 ATOH7Q8N100 152 aa13.05□□□□□ -0.32
DNMT3A-205ENST00000402667 SLC50A1Q9BRV3 221 aa13.05□□□□□ -0.32
DNMT3A-205ENST00000402667 USP9XQ93008 2570 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-205ENST00000402667 TRGV3P03979 118 aa13.05□□□□□ -0.32
DNMT3A-205ENST00000402667 ATP6V0BQ99437 205 aa13.05□□□□□ -0.32
DNMT3A-205ENST00000402667 U3KQE9 123 aa13.05□□□□□ -0.32
DNMT3A-205ENST00000402667 TMEM213A2RRL7 107 aa13.04□□□□□ -0.32
DNMT3A-205ENST00000402667 MSMBP08118 114 aa13.04□□□□□ -0.32
DNMT3A-205ENST00000402667 ZNF575Q86XF7 245 aa13.04□□□□□ -0.32
DNMT3A-205ENST00000402667 CSN3P07498 182 aa13.04□□□□□ -0.32
DNMT3A-205ENST00000402667 SPATA12Q7Z6I5 190 aa13.04□□□□□ -0.32
DNMT3A-205ENST00000402667 RBAKDNA6NC62 111 aa13.03□□□□□ -0.32
DNMT3A-205ENST00000402667 H3BUX3 64 aa13.03□□□□□ -0.32
DNMT3A-205ENST00000402667 IGF1P05019 195 aa13.03□□□□□ -0.32
DNMT3A-205ENST00000402667 RPS20P60866 119 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms