RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SPCS2Q15005 226 aa6.06□□□□□ -1.44
CAPN3-208ENST00000397204 ESRGQ1W209 222 aa6.06□□□□□ -1.44
CAPN3-208ENST00000397204 SMUG1Q53HV7 270 aa6.06□□□□□ -1.44
CAPN3-208ENST00000397204 CYP2G1PQ6ZSU1 146 aa6.06□□□□□ -1.44
CAPN3-208ENST00000397204 ACOT7LQ6ZUV0 252 aa6.06□□□□□ -1.44
CAPN3-208ENST00000397204 LINC00612Q8N6U2 182 aa6.06□□□□□ -1.44
CAPN3-208ENST00000397204 RNASE8Q8TDE3 154 aaKnown RBP6.06□□□□□ -1.44
CAPN3-208ENST00000397204 RPUSD4Q96CM3 377 aaKnown RBP6.06□□□□□ -1.44
CAPN3-208ENST00000397204 UHRF2Q96PU4 802 aa6.06□□□□□ -1.44
CAPN3-208ENST00000397204 SLC25A21Q9BQT8 299 aaPredicted RBP6.06□□□□□ -1.44
CAPN3-208ENST00000397204 FABP12A6NFH5 140 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 OR5G3P0C626 314 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 CXCL2P19875 107 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 ANXA7P20073 488 aaKnown RBP6.05□□□□□ -1.44
CAPN3-208ENST00000397204 TNFSF8P32971 234 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 AP3S2P59780 193 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 PXDC1Q5TGL8 231 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 TMED4Q7Z7H5 227 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 DYNC2LI1Q8TCX1 351 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 KRTAP1-5Q9BYS1 174 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 NPVFQ9HCQ7 196 aa6.05□□□□□ -1.44
CAPN3-208ENST00000397204 MRPS16Q9Y3D3 137 aaKnown RBP6.05□□□□□ -1.44
CAPN3-208ENST00000397204 A0A0J9YY99 117 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 SMCO3A2RU48 225 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 PMS2P5A8MQ11 134 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 SNURFLB1AK76 121 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 EPM2AB3EWF7 344 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 FNDC10F2Z333 226 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 K7EPK0 472 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 SFT2D2O95562 160 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 HOXB5P09067 269 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 LINC00869P0C866 280 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 SMIM18P0DKX4 95 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 LCN15Q6UWW0 184 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 PATE2Q6UY27 113 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 CCDC190Q86UF4 302 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 DEDD2Q8WXF8 326 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 BCL7BQ9BQE9 202 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
CAPN3-208ENST00000397204 ZNF331Q9NQX6 463 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-208ENST00000397204 CCDC59Q9P031 241 aaKnown RBP6.04□□□□□ -1.44
CAPN3-208ENST00000397204 GAGE12BA1L429 117 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 H3BP45 60 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 MRPS12O15235 138 aaKnown RBP6.03□□□□□ -1.44
CAPN3-208ENST00000397204 GAGE7O76087 117 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 RLN2P04090 185 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 GAGE12FP0CL80 117 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 GAGE12GP0CL81 117 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 GAGE12IP0CL82 117 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 DLK1P80370 383 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 DAZ2Q13117 558 aaKnown RBP6.03□□□□□ -1.44
CAPN3-208ENST00000397204 RAB2BQ8WUD1 216 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 SMIM8Q96KF7 97 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 C8orf49Q96NF6 230 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 SLC50A1Q9BRV3 221 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 ARL6Q9H0F7 186 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 ZNF586Q9NXT0 402 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 PSENENQ9NZ42 101 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 PTTG2Q9NZH5 202 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
CAPN3-208ENST00000397204 GOSR2O14653 212 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 SIVA1O15304 175 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 INAFM2P0DMQ5 153 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 TMBIM6P55061 237 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 UBE2MP61081 183 aaKnown RBP6.02□□□□□ -1.45
CAPN3-208ENST00000397204 POLR2GP62487 172 aaKnown RBP eCLIP6.02□□□□□ -1.45
CAPN3-208ENST00000397204 PPP1R1AQ13522 171 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 C21orf62-AS1Q17RA5 79 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 GFI1BQ5VTD9 330 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 BPIFA4PQ86YQ2 179 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 TOMM5Q8N4H5 51 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 OR10P1Q8NGE3 313 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 C18orf15Q96N68 181 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 PYGO2Q9BRQ0 406 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 MRPS26Q9BYN8 205 aaKnown RBP6.02□□□□□ -1.45
CAPN3-208ENST00000397204 ARV1Q9H2C2 271 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 PXMP4Q9Y6I8 212 aa6.02□□□□□ -1.45
CAPN3-208ENST00000397204 TSC22D2O75157 780 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 LEPP41159 167 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 LINC00315P59091 139 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 TAS2R30P59541 319 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 TMEM14EPQ6UXP3 125 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 LINC00305Q7Z4B0 112 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 LYPD1Q8N2G4 141 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 MCFD2Q8NI22 146 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 SAT2Q96F10 170 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-208ENST00000397204 VSIG2Q96IQ7 327 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 ODF3Q96PU9 254 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 GGACTQ9BVM4 153 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 SLIRPQ9GZT3 109 aaKnown RBP6.01□□□□□ -1.45
CAPN3-208ENST00000397204 MGAT4CQ9UBM8 478 aa6.01□□□□□ -1.45
CAPN3-208ENST00000397204 A0A096LPF7 62 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 TRAV12-3A0A0B4J271 114 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 C9orf170A2RU37 121 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 PRAC2D3DTV9 90 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 CT45A10P0DMU9 189 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 XGP55808 180 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 RRAS2P62070 204 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms