RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TRAPPC1Q9Y5R8 145 aa2.66□□□□□ -1.98
HMGB1P10-201ENST00000395823 CHCHD2Q9Y6H1 151 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P10-201ENST00000395823 U3KQK5 164 aa2.66□□□□□ -1.98
HMGB1P10-201ENST00000395823 MYO3AQ8NEV4 1616 aa2.66□□□□□ -1.98
HMGB1P10-201ENST00000395823 CHD8Q9HCK8 2581 aa2.66□□□□□ -1.98
HMGB1P10-201ENST00000395823 WIZO95785 1651 aa2.66□□□□□ -1.98
HMGB1P10-201ENST00000395823 REREQ9P2R6 1566 aa2.66□□□□□ -1.98
HMGB1P10-201ENST00000395823 ADGRL2O95490 1459 aa2.65□□□□□ -1.98
HMGB1P10-201ENST00000395823 KDM5DQ9BY66 1539 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 TRBV20-1A0A075B6N2 111 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 A0A0B4J2C4 111 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 A6NED7 52 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 RER1O15258 196 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 SYNGR2O43760 224 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 SLC25A5P05141 298 aaKnown RBP2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 TRGC1P0CF51 173 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 TPT1P13693 172 aaKnown RBP2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 ETV6P41212 452 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 MRPS36P82909 103 aaKnown RBP2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 PYY3Q5JQD4 70 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 ZNF705AQ6ZN79 300 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 RPRMLQ8N4K4 120 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 LINC00311Q8N616 119 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 TICRRQ7Z2Z1 1910 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 SCN4AP35499 1836 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 ADAMTS12P58397 1594 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 THADAQ6YHU6 1953 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 RGPD1P0DJD0 1748 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 SPHKAPQ2M3C7 1700 aa2.65□□□□□ -1.99
HMGB1P10-201ENST00000395823 CICQ96RK0 1608 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 COL1A2P08123 1366 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 VCANP13611 3396 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 IGKV1D-37A0A075B6S9 117 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 C3orf85A0A1B0GTC6 90 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 C17orf51A8MQB3 221 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 TMEM262E9PQX1 116 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 G3V3Q6 166 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 NPYP01303 97 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 IGHV3-53P01767 116 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 IGHV3-7P01780 117 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 HBDP02042 147 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 SLC25A16P16260 332 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 KLRD1Q13241 179 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 NOXRED1Q6NXP6 359 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 ZFAND2AQ8N6M9 145 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 PACRGLQ8N7B6 248 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 WFDC5Q8TCV5 224 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 RNASE6Q93091 150 aaKnown RBP2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 LINC00526Q96FQ7 95 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 ZC2HC1AQ96GY0 325 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 VAMP8Q9BV40 100 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 AGPAT4-IT1Q9H0P7 198 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 SLC35B3Q9H1N7 401 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 BET1LQ9NYM9 111 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 ZNF443Q9Y2A4 671 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 KMT2EQ8IZD2 1858 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 NUP205Q92621 2012 aa2.64□□□□□ -1.99
HMGB1P10-201ENST00000395823 KMT2BQ9UMN6 2715 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 MYO5BQ9ULV0 1848 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 NAV1Q8NEY1 1877 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 UACAQ9BZF9 1416 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 IGKV1-9A0A0C4DH69 117 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 H3BT86 120 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 SLC25A20O43772 301 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 IGHV1-69P01742 117 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 TRACP01848 142 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 CTSDP07339 412 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 TRAPPC2P0DI81 140 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 TRAPPC2BP0DI82 140 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 NFYAP23511 347 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 HLA-DMBP28068 263 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 RNASE4P34096 147 aaKnown RBP2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 FOXA1P55317 472 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 KRTAP10-8P60410 259 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 CLLU1Q5K131 121 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 C9orf153Q5TBE3 101 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 OR2T2Q6IF00 324 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 ZNF322Q6U7Q0 402 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 DPPA3Q6W0C5 159 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 LINC00299Q6ZSB3 139 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 C7orf65Q6ZTY9 151 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 SPATA12Q7Z6I5 190 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 OR5AK2Q8NH90 309 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 PSMF1Q92530 271 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 DIRC1Q969H9 104 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 C11orf1Q9H5F2 150 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 NHP2Q9NX24 153 aaKnown RBP2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 LINC00588Q9Y4M8 146 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 SCN10AQ9Y5Y9 1956 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 EFCAB6Q5THR3 1501 aa2.63□□□□□ -1.99
HMGB1P10-201ENST00000395823 ADGRB2O60241 1585 aa2.62□□□□□ -1.99
HMGB1P10-201ENST00000395823 KIF14Q15058 1648 aa2.62□□□□□ -1.99
HMGB1P10-201ENST00000395823 CACNA1DQ01668 2161 aa2.62□□□□□ -1.99
HMGB1P10-201ENST00000395823 A0A1W2PRS3 328 aa2.62□□□□□ -1.99
HMGB1P10-201ENST00000395823 FAM24AA6NFZ4 105 aa2.62□□□□□ -1.99
HMGB1P10-201ENST00000395823 LECT2O14960 151 aa2.62□□□□□ -1.99
HMGB1P10-201ENST00000395823 CREBL2O60519 120 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P10-201ENST00000395823 SH2D1AO60880 128 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms