RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 PSG9Q00887 426 aa0.91□□□□□ -2.26
TRAJ40-201ENST00000390497 LINC00299Q6ZSB3 139 aa0.91□□□□□ -2.26
TRAJ40-201ENST00000390497 OR5H6Q8NGV6 325 aa0.91□□□□□ -2.26
TRAJ40-201ENST00000390497 OR5AK2Q8NH90 309 aa0.91□□□□□ -2.26
TRAJ40-201ENST00000390497 CCL4L1Q8NHW4 92 aa0.91□□□□□ -2.26
TRAJ40-201ENST00000390497 PRELID3AQ96N28 172 aa0.91□□□□□ -2.26
TRAJ40-201ENST00000390497 NDUFAF1Q9Y375 327 aa0.91□□□□□ -2.26
TRAJ40-201ENST00000390497 ANKRD30AQ9BXX3 1397 aa0.91□□□□□ -2.26
TRAJ40-201ENST00000390497 A2MP01023 1474 aa0.91□□□□□ -2.26
TRAJ40-201ENST00000390497 ERBINQ96RT1 1412 aa0.9□□□□□ -2.26
TRAJ40-201ENST00000390497 DLC1Q96QB1 1528 aa0.9□□□□□ -2.26
TRAJ40-201ENST00000390497 PEAK1Q9H792 1746 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 TNRC6BQ9UPQ9 1833 aaKnown RBP0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 MYH7BA7E2Y1 1941 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 MYLKQ15746 1914 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 MICAL3Q7RTP6 2002 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 TRBV27A0A0K0K1C4 114 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 C9orf170A2RU37 121 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 C5orf67F2Z3F1 127 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 TPT1P13693 172 aaKnown RBP0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 MAXP61244 160 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 LSM3P62310 102 aaKnown RBP0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 VMA21Q3ZAQ7 101 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 SPRNQ5BIV9 151 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 LINC00305Q7Z4B0 112 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 TMEM35BQ8NCS4 154 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 MRPL40Q9NQ50 206 aaKnown RBP0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 GINS2Q9Y248 185 aa0.9□□□□□ -2.27
TRAJ40-201ENST00000390497 RP1L1Q8IWN7 2480 aaPredicted RBP0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 TRAV13-1A0A0B4J241 112 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 J3KT08 172 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 TRACP01848 142 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 KRTAP10-4P60372 401 aaPredicted RBP0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 CASC2Q6XLA1 102 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 AKAP14Q86UN6 197 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 MORN4Q8NDC4 146 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 PYDC1Q8WXC3 89 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 ANP32BQ92688 251 aaKnown RBP0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 CCDC115Q96NT0 180 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 AMELYQ99218 206 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 COL24A1Q17RW2 1714 aa0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 BAZ2BQ9UIF8 2168 aaKnown RBP0.89□□□□□ -2.27
TRAJ40-201ENST00000390497 CACNA1BQ00975 2339 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 ARAP1Q96P48 1450 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 LOC107984640A0A0U1RRK4 108 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 LOC107986453A0A1B0GWG9 222 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 JMJD7-PLA2G4BH0Y9G9 81 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 IGHV3-33P01772 117 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 NBEAP1P0C6P0 100 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 DIAPH2-AS1Q14236 149 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 HRCT1Q6UXD1 115 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 LINC00575Q6W349 94 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 FOXI2Q6ZQN5 318 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 OR5A2Q8NGI9 324 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 CLEC2BQ92478 149 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 PSMF1Q92530 271 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 ZC2HC1AQ96GY0 325 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 AP1S3Q96PC3 154 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 HEATR5BQ9P2D3 2071 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 TRIOBPQ9H2D6 2365 aa0.88□□□□□ -2.27
TRAJ40-201ENST00000390497 A0A1B0GX51 115 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 NCR3O14931 201 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 PPYP01298 95 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 RPL7P18124 248 aaKnown RBP0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 RPS28P62857 69 aaKnown RBP0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 KRTAP21-2Q3LI59 83 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 CCSMST1Q4G0I0 132 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 LINC00269Q8N2A0 174 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 NAT14Q8WUY8 206 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 AIF1LQ9BQI0 150 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 TAF9BQ9HBM6 251 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 TRAPPC2LQ9UL33 140 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 N4BP2Q86UW6 1770 aaPredicted RBP0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 OVOS2A0A0G2JMS6 1433 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 FAM135BQ49AJ0 1406 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 ALPK2Q86TB3 2170 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 OTOGLQ3ZCN5 2332 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 SDK1Q7Z5N4 2213 aa0.87□□□□□ -2.27
TRAJ40-201ENST00000390497 COL1A1P02452 1464 aaPredicted RBP0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 FREM1Q5H8C1 2179 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 E9PCH4 1651 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 H3BMG7 143 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 SCGB1A1P11684 91 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 RPS3P23396 243 aaKnown RBP eCLIP0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 ETV6P41212 452 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 MIR22HGQ0VDD5 57 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 SPATA45Q537H7 98 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 GLIPR1L1Q6UWM5 242 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 OR8I2Q8N0Y5 310 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 OR10AC1Q8NH08 325 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 C19orf12Q9NSK7 152 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 DOCK4Q8N1I0 1966 aa0.86□□□□□ -2.27
TRAJ40-201ENST00000390497 MED23Q9ULK4 1368 aa0.85□□□□□ -2.27
TRAJ40-201ENST00000390497 TRAV36DV7A0A075B6V5 113 aa0.85□□□□□ -2.27
TRAJ40-201ENST00000390497 BORCS7-ASMTA0A0B4J1R7 106 aa0.85□□□□□ -2.27
TRAJ40-201ENST00000390497 PNMA8CA0A1B0GUJ8 204 aa0.85□□□□□ -2.27
TRAJ40-201ENST00000390497 SULT1C4O75897 302 aa0.85□□□□□ -2.27
TRAJ40-201ENST00000390497 DPM2O94777 84 aa0.85□□□□□ -2.27
TRAJ40-201ENST00000390497 CRYGSP22914 178 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms