RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 PRO1854Q9UHT4 67 aa10.17□□□□□ -0.78
SRGAP3-202ENST00000383836 PAX8Q06710 450 aa10.17□□□□□ -0.78
SRGAP3-202ENST00000383836 ERCC8Q13216 396 aa10.17□□□□□ -0.78
SRGAP3-202ENST00000383836 TAL2Q16559 108 aa10.17□□□□□ -0.78
SRGAP3-202ENST00000383836 CHCHD5Q9BSY4 110 aa10.17□□□□□ -0.78
SRGAP3-202ENST00000383836 HLA-DMBP28068 263 aa10.17□□□□□ -0.78
SRGAP3-202ENST00000383836 DEFB121Q5J5C9 76 aa10.17□□□□□ -0.78
SRGAP3-202ENST00000383836 DTX1Q86Y01 620 aa10.17□□□□□ -0.78
SRGAP3-202ENST00000383836 NCOR2Q9Y618 2525 aa10.17□□□□□ -0.78
SRGAP3-202ENST00000383836 TRGV4A0A0C4DH28 118 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 K7ERJ3 54 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 RBMY1FQ15415 496 aaKnown RBP10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 IGKV1-12A0A0C4DH73 117 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 IGKV1D-12P01611 117 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 IGHV1-2P23083 117 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 BSPH1Q075Z2 132 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 SMRP1Q8NCR6 262 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 LY6G5BQ8NDX9 201 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 C15orf62A8K5M9 175 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 HTN3P15516 51 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 CCL3L1P16619 93 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 CEACAM8P31997 349 aaPredicted RBP10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 IGKV1-27A0A075B6S5 117 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 IGHV3OR16-10A0A075B7F0 116 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 KIR2DL5BA0A0G2JN68 375 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 KIR2DL5BA0A0G2JPC4 375 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 KIR2DL5AQ8N109 375 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 TLN1Q9Y490 2541 aaKnown RBP10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 PRIMA1Q86XR5 153 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 C14orf178Q8N769 122 aaPredicted RBP10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 WFDC12Q8WWY7 111 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 CFHR2P36980 270 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 YPEL3P61236 119 aaPredicted RBP10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 ARMS2P0C7Q2 107 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 HOXD3P31249 432 aaPredicted RBP10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 TMEM141Q96I45 108 aa10.16□□□□□ -0.78
SRGAP3-202ENST00000383836 LOC102723996A0A087X1L8 192 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 TLN2Q9Y4G6 2542 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 SMIM20Q8N5G0 67 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 TRAV13-1A0A0B4J241 112 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 LINC00477Q96M19 166 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 LRRK2Q5S007 2527 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 SP9P0CG40 484 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 TRBV6-6A0A0A6YYG2 114 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 PATE3B3GLJ2 98 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 PRB4P10163 310 aaPredicted RBP10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 MORN5Q5VZ52 161 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 ZNF492Q9P255 531 aa10.15□□□□□ -0.78
SRGAP3-202ENST00000383836 NDUFC2O95298 119 aa10.15□□□□□ -0.79
SRGAP3-202ENST00000383836 Q6ZS49 121 aa10.15□□□□□ -0.79
SRGAP3-202ENST00000383836 TIAF1O95411 115 aa10.15□□□□□ -0.79
SRGAP3-202ENST00000383836 C17orf100A8MU93 164 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 CELA3AP09093 270 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 ZNF114Q8NC26 417 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 DOPEY1Q5JWR5 2465 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 PDE6HQ13956 83 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 STPG1Q5TH74 334 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 Q8TAT8 98 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 KLF2Q9Y5W3 355 aaPredicted RBP10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 IGHV3-11P01762 117 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 IGLC7A0M8Q6 106 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 PRSS46E5RG02 174 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 SLC25A16P16260 332 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 MUC6Q6W4X9 2439 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 V9GYV3 84 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 SRRM4A7MD48 611 aaKnown RBP10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 SRD5A1P18405 259 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 CFPP27918 469 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 RBM3P98179 157 aaKnown RBP10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 SUMO4Q6EEV6 95 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 C15orf53Q8NAA6 179 aa10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 RPUSD1Q9UJJ7 312 aaKnown RBP10.14□□□□□ -0.79
SRGAP3-202ENST00000383836 GPR179Q6PRD1 2367 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 IGHV3-73A0A0B4J1V6 119 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 CRYGSP22914 178 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 VDAC2P45880 294 aaPredicted RBP10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 LINC00479Q96M42 142 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 RCHY1Q96PM5 261 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 CYYR1Q96J86 154 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 TRAV3A0A0B4J244 114 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 A0A1W2PR77 199 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 DEFB104AQ8WTQ1 72 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 INS-IGF2F8WCM5 200 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 INSP01308 110 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 FAM104BQ5XKR9 115 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 COL4A1P02462 1669 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 IGLV3-32A0A0A0MS00 114 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 F8WEM9 126 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 FOXF2Q12947 444 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 C15orf32Q32M92 178 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 C6orf226Q5I0X4 101 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 Q8N8P6 123 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 ABCA2Q9BZC7 2435 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 FGFBP3Q8TAT2 258 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 NEU4Q8WWR8 484 aaPredicted RBP10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 COL5A1P20908 1838 aaPredicted RBP10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 CARD19Q96LW7 228 aa10.13□□□□□ -0.79
SRGAP3-202ENST00000383836 J3KT08 172 aa10.12□□□□□ -0.79
SRGAP3-202ENST00000383836 CDPF1Q6NVV7 123 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms